result

Gene information

Detail information of AfisC5G05734

Location

Gene	Chr	Start	End	Strand
AfisC5G05734	chr5	1058670358	1058673217	+

Sequences

CDS

Protein

Gene

>AfisC5G05734
TATTTCTCCTTTCTTCTCCATTTCGAGATTCCAACTCCAAATCATCGCAACCAAACTCAATTAGGAAGCCCTAACCACCATCTTTGTTTTTTTGGCTCTGCTATGAAAACTCCCCCAAGTATGCTATTTTTCCATTCTCGATTATGCATTATTTACTCAATTCAATAAGTTTTGCATTATTTTATCTTTGTTAGACTGATTGATTTAGTAGATTTTATTACTCCAATCAATGGTATTTGCTTTATGTAACTATTTAGATTTTGACAGTAATTTGGGGATTTCAAACTTTGGTCGAATTATATAAGGTGCTTTAATTATTTCGTAGCAGGAGTACAAAGAAAGGACGATCTGGTTGGAAATTTTTGTTGTTTTTTAGTACCTAGGGTATCTTGTGAATTTGTAGAAACAGTATATAACTGCTAATTTTTTTAGTTATTTAACTTTGCTTATGTTATACAGTTATTAGTATGAGCTGAGAATGGCTCTTTTTTAATACCTTTTCAAGCATTGAAAATAAATTCCGTAAACAAATTTTCCAATGCACTATTTAAAAATATTCAGGGTTGGAAACAAAATACAATAACAACGATAAACAAAATCGATCAATAACGATGAAATTATGTTTAAAACAATATACTGTACTCATGTGAAGAAAAGAATACATCTTTTGGTTCATCGTGCACAGTACATATTTAACAAAAAAAAAAAAAATGAAACATTTGGGGGTATGAACTTGATTTATTCAAAAGTGACGATAAAAGTGCAATCTTGCTAGGGACAAAGATAAAACTCAAAGATGAAAGGTAAACTCAAATGTAAGCTATTGTATAAAATAATTCTTTTATGTTTAGATATGAAGTACTACTACATCAAGGAATATGCCTAACTAGCTACAAGATATCTTCACCTTAAAATGTTGGTGCCACTATTGACATTTAAAACATCATATACTAATAAAGTGTAACATGTGAATCACACATGCAATTACATTTGGAAGCTTTGTAAGTACTTTTGATAAATACTAAGGACCATTCACTGATATCTGGTTGATATTCGTTGGCAATTGTTATTTAAAACCGCAGAACCTTGATGCTCAGCAAATTATATGACTTAAATGTGGGCATACAAACTGACTGCAATGTTTGTGCCCTAAAGATAAAATCCTTTTGGAACCCTACTCTATGAATTTCTAAAATAAACTGTACAACCGACACTATTATTATTGCTTTAACAATTTGAAACTGAACTATTGTATGCGTTTGTTAAATGCCTCTTGATTGTTATGTTCATTCTCAAGTTTAATGGAATATGCTTGGATCCTACAATGAAGATTTCTATTTATATAGAATTATCTAATAGTTAGTTTCTTGTTTACAAGCTACATCATCAGCCCTTGATAAATAATGTATCCAAGTGGCATTATGAGGTGTTGTGCATTGCTTAAGCTACCAAATAAAGTGTCAAATTCCTATGTCATCTGTCAGAATATTTATATAAATTACTTGTTATATTTATAATACACATTCTGCATAAAGTGATTTCGGATGTCTAAATCAATAGTACAGGTACATGGCTCCAGAACATGCCTTATATGGAAAACTAACTGATAGGTCTGATGTATTTTCATTTGAAGTTGTTCTTCTTGAGCTTATTACTGGACCCAGGCCCATGGATCCTTCCCAAACTTTAGGAGACGGAAATTTGATTGAATGGGTATGTGAAATGACTTACTTTAATGCTTACAGTAGTTTAATTTATGCTTTAATTGAATTTATATATTTGTTCTATTGATTTTTTTCTCCTGAACTCTTTTTAAATAACCATTCACTTTACTTGAATTAAACATTTTACTTAACCATTTGCTTTGAATCTGTCTATTCTAATATCATGTACATACTTATATTCATCATCTCATATTCTTTTTCATTAATCAATATTATTTCAATACAAGGATGATCTATCTTTTCCTATTTACAAAAGTGGAAATCATAAAATTACAACTGCTCCCAAAATTGCTGAGCTATCACTACAATGTTGTTAGGTTCACGGTTGCGAAGAAAACATAAAAATTTATGGTAATTTGATAGCATAGAGTTTTGATTAATAGATTAGGAAAACTTATGATAATCAGATGGTATAGAGTGGATTTTGTATGGTACCAACATATATGTCCATGCTTTTACCCTTTGTCTATGCAGTTAGTATTTCAATACTTATGCTATGGGGGCATTTCACTAGAAGGACAAACTTTGCAGTCCAATTAGTTTCTAGGACACACATTCAAAGAAATTACTTTCAAGGCCAAAGTCAGCAGAATAATTACTTTCAAGGACAAAGTCAGCAGTCCAATTACTTTCAAGGACATAATTTCATAGGTTTTTAGGCCCTAGAAACTAATTATTTTACATTTTGTCCTTAAAAGTAATTATTTCAGTTGTGTGTCCTAGAAATTAATTCCATTTGCTAAAGAGACCCTTGTGGCTAATTTTCACTATGGGTATATTTAACTTGAAAGGTATTTCACTATCTTATGTGGATTCAACTTTTGAGATTGGAGGTTTTAAATGCACTATATGACAATATCACCCACAATCCATCCTCACTCTCTATATATCATGACTATATTGAATTGTATACCGATTGTTTCTACTACATGTGTTATGTGAGTCAGAAATAAATGCATTATAAATTGACAAATGATTGATGTAGTCTTTGATTCAAAACCGTTTTGATTAATCGTCTAATTTTAATGTACGAAAATTTTGAGTGTGATAACATTTGTTTGTGCAGTTCTTGTACAAGATTATAACTATACGATGGCACTTGCTGAAGAGGTTTTAAGGGAGTCCTACCACAAGTT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020267818.1	6.5e-13	proline-rich receptor-like protein kinase PERK8
Swissprot	Q9SGY7.2	1.3e-13	Proline-rich extensin-like receptor kinase 11
trEMBL	A0A5P1EWP2	4.7e-13	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G10620.1	64.81	1e-14	74.7	AtPERK11;PERK11	Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G05734	AT1G10620.1	54	19	1	54	537	590	64.81	1e-14	74.7
AfisC5G05734	AT1G68690.1	48	14	1	48	543	590	70.83	1e-14	74.7
AfisC5G05734	AT1G26150.1	48	14	1	48	597	644	70.83	1e-14	74.7

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	1	35	24.6	1.2e-05

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0016021	C	integral component of membrane
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0005199	F	structural constituent of cell wall
GO:0005524	F	ATP binding
GO:0007166	P	cell surface receptor signaling pathway
GO:0019722	P	calcium-mediated signaling
GO:0009506	C	plasmodesma
GO:0009611	P	response to wounding
GO:0009620	P	response to fungus
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0009845	P	seed germination
GO:0010068	P	protoderm histogenesis
GO:0019901	F	protein kinase binding
GO:0042335	P	cuticle development
GO:0046777	P	protein autophosphorylation
GO:0048364	P	root development
GO:0048367	P	shoot system development
GO:1900459	P	positive regulation of brassinosteroid mediated signaling pathway
GO:1905393

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network