result

Gene information

Detail information of AfisC5G05767

Location

Gene	Chr	Start	End	Strand
AfisC5G05767	chr5	1063804384	1063808557	+

Sequences

CDS

>AfisC5G05767
ATGTATGAGCAATCTTACTCTTCTTCATCTTCATCTTCTTCATATTCCATTAATTCCTCGTCTATTGGGAAAAAGGTTTTAGTTGGAGTGAGTCTCAATGAAAAGGCAAATATGGAATTGCTTTCTTGGGCGGTTGAAGTTGCTTCTAAAACAAACGGTACAGTCGTTGCATTGCATGTACTCGTTGAGAAAGAGGAGAACTATGATGTAAATAGATATCGATGCTCCAAGGCATTTGTTATATCAGTTCTAGGCGAGTTTGTTGAGATTTGCCAAACTAAACAGGTGAGATTAGAGGCAAAGGTGAAGTGCAGTTCAAGAATTGAAAAAGGACTTACAGATGAAGCTGCAGTATCAAACGCAGACTATCTACTAATTGGTGGCTCTAGAAATCAATCTCAAAAGTTTTTGGAAATCCTGCAGTACTGCTTCAAGCATTGCCCTGAAACCTGCTCTGTTGTGGCTATCTGCACACAAAACAATACGGACCAGAACGCTACCATCCTAAACAAACATAGAACTTATGAGTGTAAATCTTCATTTGGAAGTTTATGTGAAGACAATGATGAAGAATTGTCTAGTCCTATAATGAAAAGAAAGAGTGATAGACGTAGTCAAAGTGGTATTTGGAGAAGACTATCATTTGTCAAGATACTCTCTCCTTTATTTCGATCCTCCTTATCGGATGATATAGAAGATGATAGTAGCATAATCCGATGTGCAAAAAACTTTGTCGATCAAAAGCCTACATGGAAATGTTTTACTTATGAGGAGATTTCTCATGCAACAGATAATTTCAGCCAAGAAAACATGGTGGGAAGAGGAGGATACGCAGAAGTGTTCAAAGGGAGACTCCATGATGGTCAAAAAGTAGCGGTAAAGCGACTGTCCAAAGGTAACAAAACCGAGACAAAGGAAAAAGAATTTCTAACGGAACTTGGAATAGTTGGCCATGTCTTTCATCAAAACACGGCATATTTAAAAGGGTGCTGTATCGAAAATGGCCTACATCTTGTGTTTGATTTCTCTCCTAATGGAACCTTAGCATCCGCTTTACATGGAGTAGGTAGCAAACCACTTGAGTGGAAGGCAAGGTATAAGATTGCAATAGGAGTTGCTCGAGGTTTGCATTACCTTCATAAGTGCTGCAAGCGTCGCATTATTCATAGGGACATCAAAGCTTCAAATGTACTTCTGGGTCCAGAATTTGAGCCTCAGATTTCAGATTTTGGTCTAGCAAAATGGCTACCGAGGCAATGGACTCATCACTATGTCAACCCAATAGAGGGAACTTTCGGATACTTAGCGCCAGAGTACTTCATGCATGGAGTAGTGGATGAAAAAACAGATGTATTTGCATATGGAGTTTTGCTTCTTGAGATCATAAGCGGTCGAAGGCCCATTGATTCTACTAAACCAAGTTTGCTTTTATGGGCAAAGCCACTTATAGAGTCGAACAGTTTGGTAGAATTGGTTGATCCAAAGCTTGAGGGTTCATTTGATATGGAGGAGTTGGAAAGATTAGCCATTGTGGCTTCCAACTGTACCTGTCAGGCATCTACATGGCGACCATCCATGAGTGAGGTGTTAGAGCAATTAATTAGTGTGGATGATTCGGAAATCATGGAGAACTTGAAGGAAAGTGACTTGCATAGTGTTGAACTAGATGATTATATTGTTATTTGA

Protein

Gene

>AfisC5G05767
CAAAAAATGTATGAGCAATCTTACTCTTCTTCATCTTCATCTTCTTCATATTCCATTAATTCCTCGTCTATTGGGAAAAAGGTTTTAGTTGGAGTGAGTCTCAATGAAAAGGCAAATATGGAATTGCTTTCTTGGGCGGTTGAAGTTGCTTCTAAAACAAACGGTACAGTCGTTGCATTGCATGTACTCGGTAAGTTTTTAACGATATTTTCAGTTAATGTTGATTATATGCTAAGTTTATTTTTGTTGGCAGTTGAGAAAGAGGAGAACTATGATGTAAATAGATATCGATGCTCCAAGGCATTTGTTATATCAGTTCTAGGCGAGTTTGTTGAGATTTGCCAAACTAAACAGGTATGTCAAGATTAACCAAAATTCTAGACTTAGTATATTATGTATATGATACGGTGATTATGGCAATAATATGATATGCTCTACTACATCACACATTGCTGCCCGGCAGCTACAAAATTCCAACTAAATATTAGTAGCAACTGTTACAATTTGGTGCATCAATGTTATGCAGGCATGACAAGGCACTAAAGACAAGAATGATAGCAACTTTATTTTTTTCATTTGCCTTCTGTTACTAATCATGTGCTCTGAATTATACATTTCATGAGCAAATAGAATTATGCCACTTGTTGAATTAGTTATATGTAAAACAAAATGTATCGGTTATAAAAGAGGTGGAATGAAAAGGATTCAGTAGGCTGGAATTAAATCAATTTATCTTCTCTGATTTCTCTTCTTTCCTTCTCCTTCTTCCTCAAACAAATTAGTGCCGTATCATTTGATGCTTTCACTCTTGTTCTCACCTCCTTCGTCTATCTCTCATCTCTTTCGTCATTTCGCAAGATTGAACCATGGTCGAAAACATCAACCACAACCACACTACCGACAAATCCATCCAACAACTCCATGACACCACCATCCGACATCAAACCGCCATCAACACCATTCAAGCCACCTTTGAAACTCAACAAAAAGTCATCATCGACATCAAAACCTCCATCGTCGATATCCGAACCTCCATTAATCATATCATTCACTCCTCTGCTGAAAATATGCTCATATTGTGCATGTATGTAGATTGTGTGTTCATATATGTATGTAATGTAAGTTCTGTTTATACATGATAAAATCTCCTAAACACAAATAAATAAAACATTAATGTAACGGACTTAATTGGAAATCTGTTGCTTAGGTGAGATTAGAGGCAAAGGTGAAGTGCAGTTCAAGAATTGAAAAAGGACTTACAGATGAAGCTGCAGTATCAAACGCAGACTATCTACTAATTGGTGGCTCTAGAAATCAATCTCAAAAGTAAATTCAACTCTCAGCTATTCGATTTTTTATATATAGATAATATTTTCTATATATGCCATTCAAAGAATGCATTCATGTGTAGCAATTAAATAATAATTGCAGGTTTTTGGAAATCCTGCAGTACTGCTTCAAGCATTGCCCTGAAACCTGCTCTGTTGTGGCTATCTGCACACAAAACAATACGGACCAGAACGCTACCATCCTAAACAAACATAGAACTTATGAGTGTAAATCTTCATTTGGAAGTTTATGTGAAGACAATGATGAAGAATTGTCTAGTCCTATAATGAAAAGAAAGAGTGATAGACGTAGTCAAAGTGGTATTTGGAGAAGACTATCATTTGTCAAGATACTCTCTCCTTTATTTCGATCCTCCTTATCGGATGATATAGAAGATGATAGTAGCATAATCCGATGTGCAAAAAACTTTGTCGATCAAAAGCCTACATGGAAATGTTTTACTTATGAGGAGATTTCTCATGCAACAGATAATTTCAGCCAAGGTAAGACTTTTAAGAATGTTAAAGTAGTATCCTGATAATCCATACCTTCCTTGTTCATAAACTGAGCAATGCATCAATCAACAATTGAATAATAAGCAACCTCAAAATCTTTACACACATCTTAGCATTTTGAGCAGGTGAACTATTCTTCAGTATATACTAACCAAGAACGGAATATTGATCAAAAAACGTTACTTCGTATAACTAGCAAATTTTTTTACTGTTATCGTTGGAATTTTACTTTAAGATTTTTATTGGCATATCAGTGCTTTGATCAAATGTACTACTATATATGAAACTAACTGTGAATTGACCAATATTTTATCAGAAAACATGGTGGGAAGAGGAGGATACGCAGAAGTGTTCAAAGGGAGACTCCATGATGGTCAAAAAGTAGCGGTAAAGCGACTGTCCAAAGGTAACAAAACCGAGACAAAGGAAAAAGAATTTCTAACGGAACTTGGAATAGTTGGCCATGTCTTTCATCAAAACACGGCATATTTAAAAGGGTGCTGTATCGAAAATGGCCTACATCTTGTGTTTGATTTCTCTCCTAATGGAACCTTAGCATCCGCTTTACATGGTATTATCACATAAACCCTTCTTCTTTTTTTCCTTTTCCTAAGGAACACATGACCTTTGTAGCATCATATACTAAGGTTTAAGCAATTTGGTCTGATGGTCGAAATATGATATTACTTCACTACTCTAATTTGAAACAAAACCAGGGGTAATCCTAATCCTCACAAACTTTGATAATTGGACACAATCATAAAAACTCCTTAAAATTAGTCAAAAATTAATTACAAGTAGCTTATTTCAGGTTTTATGTTGGGAACTTTTTGCAAGTAGCTTTTAAAAGTAACTGGCCAGGATAAATTTGAGAAGCAACTATTTATTGTTTATGACTTATGAAGCAAATTTATAGTCAATTTTGAACAAATATTTTCTTAGAAGTCAAATTATATCCAAAGACTTCTACTTATAAACCACTATTTAAAACTACTTAGAAGTTATTATTCAAAACTTAAAATAAGTTGTTGTCAAATAGCTCTTAATATATGAACTTATTGTACAATGCTTTTATGATGATTAGGAGTAGGTAGCAAACCACTTGAGTGGAAGGCAAGGTATAAGATTGCAATAGGAGTTGCTCGAGGTTTGCATTACCTTCATAAGTGCTGCAAGCGTCGCATTATTCATAGGGACATCAAAGCTTCAAATGTACTTCTGGGTCCAGAATTTGAGCCTCAGGTCAGTTTCAACTTTCAACCAATAGCCTTCTTCATTTAATGCAAACAATACCAGTACCATCCAAAATTAGGAAATACATAGATAATGTCACATATATTCGATGCTAACAATACCTTAATGTAAACATTTATAAAGCATTCTTAGTCGGAATTATATGGACATTGTTTAGTTCACCTGGCTCTTCAAATAAAAGTATAGAATTGATTGAGCAGATTTCAGATTTTGGTCTAGCAAAATGGCTACCGAGGCAATGGACTCATCACTATGTCAACCCAATAGAGGGAACTTTCGGGTAAATCAGTCCTCTAACGTCTAAGTACTTAAAAGCACACAATAAAATGCCTTAAGATTTAAGAAGCAATATTATATGGGATTAAACAGATACTTAGCGCCAGAGTACTTCATGCATGGAGTAGTGGATGAAAAAACAGATGTATTTGCATATGGAGTTTTGCTTCTTGAGATCATAAGCGGTCGAAGGCCCATTGATTCTACTAAACCAAGTTTGCTTTTATGGGTATGCACATAGCTAGAATGTACATTTCTACAGAAACTTCATAAAATATGGACTTAATATGCAAATTTTGATTAGGCAAAGCCACTTATAGAGTCGAACAGTTTGGTAGAATTGGTTGATCCAAAGCTTGAGGGTTCATTTGATATGGAGGAGTTGGAAAGATTAGCCATTGTGGCTTCCAACTGTACCTGTCAGGCATCTACATGGCGACCATCCATGAGTGAGGTATGCAAGAAAAAGATGCATTATTAAGAAGAAATTATTGATGTGGATTAAAGATTTTTTTGATATACAGGTGTTAGAGCAATTAATTAGTGTGGATGATTCGGAAATCATGGAGAACTTGAAGGAAAGTGACTTGCATAGTGTTGAACTAGATGATTATATTGTTATTTGAGCAGTGTATATTGTTTTGCTAGTGATTACACAGATTATCTGCTCAGCTTTGTTTTTGCTTTTGACTTTGTTTGTTTTTTTTTCCACTGGCTTCCCTTTTCTTTTTTCATTTTTCTACTCCTTTTGTTCTTTTCTTGTGTGTGTGTGTTTTGAGATTGTAGTAATACAAGGAGAT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020265838.1	5.4e-196	probable receptor-like serine/threonine-protein kinase At5g57670
Swissprot	Q5XF57.1	5.5e-129	Probable receptor-like serine/threonine-protein kinase At5g57670
trEMBL	A0A5P1EWS0	3.9e-196	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G57670.2	46.18	3e-134	475		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G05767	AT5G57670.2	550	255	7	25	546	11	547	46.18	3e-134	475
AfisC5G05767	AT2G18890.1	337	138	4	211	537	5	341	56.08	5e-108	388
AfisC5G05767	AT5G18910.1	314	132	3	248	557	174	485	56.05	5e-102	368

Ortholog group

Species	Genes
Allium cepa	g313157.t1
Allium fistulosum	AfisC5G05767
Allium sativum	Asa0G02366.1
Arabidopsis thaliana	AT5G57670.2
Oryza sativa	LOC_Os08g15060.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00582.23	Usp	Domain	24	154	25.1	1.8e-05
PF07714.14	Pkinase_Tyr	Domain	268	533	139.0	1.5e-40

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0000166	F	nucleotide binding
GO:0005829	C	cytosol
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0005634	C	nucleus
GO:0007166	P	cell surface receptor signaling pathway
GO:0009623	P	response to parasitic fungus
GO:0009814	P	defense response, incompatible interaction
GO:0010068	P	protoderm histogenesis
GO:0012505	C	endomembrane system
GO:0019901	F	protein kinase binding
GO:0042335	P	cuticle development
GO:0046777	P	protein autophosphorylation
GO:0048367	P	shoot system development
GO:0051020	F	GTPase binding
GO:0071369	P	cellular response to ethylene stimulus
GO:1905393

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network