Gene information

Detail information of AfisC5G05775

Location

Gene	Chr	Start	End	Strand
AfisC5G05775	chr5	1064603256	1064604138	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020243700.1	8.3e-52	LOW QUALITY PROTEIN: transcription factor DIVARICATA-like
Swissprot	Q8S9H7.1	1.3e-46	Transcription factor DIVARICATA
trEMBL	A0A5P1FFJ0	6.0e-52	Transcription factor DIVARICATA

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G38090.1	49.01	4e-49	191		Duplicated homeodomain-like superfamily protein

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G05775	AT2G38090.1	202	82	2	1	181	8	209	49.01	4e-49	191
AfisC5G05775	AT5G58900.1	192	82	2	9	184	21	212	48.96	2e-44	175
AfisC5G05775	AT5G01200.1	194	78	3	13	181	21	214	46.91	3e-42	168

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00249.28	Myb_DNA-binding	Domain	114	158	36.9	2.7e-09

Gene Ontology

Accession	Ontology	Name
GO:0000122	P	negative regulation of transcription from RNA polymerase II promoter
GO:0000976	F	transcription regulatory region sequence-specific DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0009414	P	response to water deprivation
GO:0009536	C	plastid
GO:0009723	P	response to ethylene
GO:0009739	P	response to gibberellin
GO:0009751	P	response to salicylic acid
GO:0009753	P	response to jasmonic acid
GO:0009787	P	regulation of abscisic acid-activated signaling pathway
GO:0009908	P	flower development
GO:0010116	P	positive regulation of abscisic acid biosynthetic process
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0046686	P	response to cadmium ion
GO:0030307	P	positive regulation of cell growth
GO:0048262	P	determination of dorsal/ventral asymmetry
GO:1901001	P	negative regulation of response to salt stress
GO:1901371	P	regulation of leaf morphogenesis
GO:2000469	P	negative regulation of peroxidase activity
GO:1905615

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network