result

Gene information

Detail information of AfisC5G05804

Location

Gene	Chr	Start	End	Strand
AfisC5G05804	chr5	1069955033	1069958251	-

Sequences

CDS

>AfisC5G05804
ATGCAATTGGTTAATGACGAAGGTGAACCAGCAGCAGTTGCAGTTGTAATCGACAAAGACAAAAATGGAAGCCAAAGTGCTCTGAAATGGGCTCTCGATAACCTTGTGATTAGGGGACAAACCATCACCCTTGTTTATGTCAATACCCCAGGACAACCATGTGATGTGAACACTGTATTTCTTCCTTTCCGTTGCTTTTGCACGAGAAAAGACGTGAAATGCAACGATGTCGTCCTTCAGGACAATGACATGATAAAGGCAATCATCGACTTTGTCTCCGAGTCCACAACTGAAAAACTGGTAATCGGTGCACCTTCATCTAAAGGAGGCTTTGTCTGGAGAATGAAATCATCGGATTACACAGCAGCCGTATCAAAAGGGGCGCCAGATTTTTGCTCTGTGTATGTGATCTCAAAAGGAAAAGTGTCATCCTTGAGAAATGCAACCCGAGCTGCTCCAGTAATGGCGACACATCTTAAGCACCAAATGACTCAAGTCAAGCCCCCTAGCAGTATCAAACATGATAGCAACAGCATTAATCGTTTTCAGCCAAGAGCCGGCCTTCCACCACTGGATAATAGTCACAGCCCACGCAGTAGCACCGCCAGCAATAATGACAGAGATACATTCAGGTCACCGTTTGCAAGAGGAGGAGGACGTGGACATAACTCAAAATATGGGGATTTTCCATTATTGCCGGATACAGACATATCATTTGTCGGAGGGAGGCCAAGCAATGATTTCATCAGCAGCACAAGCAGCTTTTATAACCAGAGGCTATCATGTCCTGAGAGCTTTGATCACAGCTTTGATATGTCCCAGCCATCATCGTCGTCCTATAATACTTCGTTTGCACCAACTCCTTCACATTACAATGGTAGCAGCAACAACAACGGCTACTCTTCTTCAAGCAGCTCTCATGGCAGCTCTTCCATGGATGATGTTGAAGCTGAGATGAAGAGACTAAGATTAGAACTGAAACAGACGATGGACATGTACAGTTCAGCATGTAAAGAGGCAATTACAGCCAAACAGAAAGCAATGGAGCTGAACCAGCACAAAAAAGCTGAAGAGGAAGCAGCAGCAGGCACGATGGATAAAGAGAAAGCGAGGATCAGAGCAGCCAAGGAGGCTGCTGAAGCATCCAAAAGAATAGCAGAACTGGAAGCACAAAAAAGAATAAGTGCAGAAAAGATGTCCATCAGCAGCAGGTCGTCTTCATCCATGGATTCACAAGGCAAAAACGGCATGATGAACAGTCCAGGAGGAGGAGGAACCACAGATATCCGTTACAGACGTTATAGTATCGAAGAAATAGAAACTGCCACAGATAACTTCTCAGAAGAAAAGAAAATTGGAGAAGGCGGGTACGGACCTGTATACAGAGGCTACTTAGATCATACCCCAGTAGCCATAAAGGTCCTACGTCCAGATGCAGCACAAGGCCGGTCCCAGTTTAATCAAGAAATAGAGATTCTAAGCTGCATAAGGCACCCTAACATGGTCCTCCTACTAGGGGCATGCCCAGAGTATGGATGCTTAGTGTACGAGTACATGGCCAATGGAAGTTTGGAGGACCGCCTGTTCAGAAAAGGGAACACGCCTCCTATTTCATGGCAGCAAAGGTTCCGTATTGCAGCTGAAATAGGAACAGGCTTGCTTTTCCTTCATCAGACTAAGCCTGAACCCTTAGTGCATAGAGACCTTAAGCCTGCAAATATACTCCTAGACCGAAACTATGGAAGCAAGATAGCGGACGTCGGGCTGGCCCGTTTAGTCCCTCCAACCGTGGCTGATTCGGTTACACAGTACTTGATGACATCGACTGCAGGCACCTTCTGTTATATCGATCCAGAGTATCAGCAAACAGGCATGCTCGGGGTCAAATCGGACATTTACTCACTGGGCATCATGCTTTTACAGATTATCACTGCTAAGCCTCCTATGGGCCTGACCCATCATGTGGAGAGGGCCATTGAGAAGGGTACATTTGAGGACATGTTGGACCCTGCTGTGCCTGACTGGCCTGTGCAGGAGGCTTTGGCTTTGGCCAAAGTCGCGATTAAGTGTGCTGAGCTACGAAAGAAGGATCGTCCTGATCTTAACACTTACATTATACCTACGCTTAACAAGCTTAGGGACATGGCTGATAATGATCTCATGTCACGCCAACAGCAGCTTTATCCCCATCCTGCTTTAGCCATCAACCATGGTGCTACACCGAGACAGAGCCAGGTTTCAATTGAGGATACTATAAGCAACCCTCTTACAAGACATTCGGGCTATGAAAGTAGATCCAGTGGATCATCCTAA

Protein

Gene

>AfisC5G05804
ATCTTGCACCGCAACTGATGCTGGTTCTTAGAAGGAGAAAGGGCAAAGAGTTTGAAATAAGAAAAGAAAATATATTGATATATATCTCCATATCATTTTCCTTCTCTTCCTGTTTCGGAACCACCTGTTCAAGTTGACAGTGGTTTTGAAAGGAAGAGGAGAGAGAAGGAAACAAAAAGAAACATATCGGAAGAGGAAGGTCTGAAACCAATAAGTGTGTAATCAATAATATGCAATTGGTTAATGACGAAGGTGAACCAGCAGCAGTTGCAGTTGTAATCGACAAAGACAAAAATGGAAGCCAAAGTGCTCTGAAATGGGCTCTCGATAACCTTGTGATTAGGGGACAAACCATCACCCTTGTTTATGTCAATACCCCAGGTAATTTATTTTAATTTGTTCCCTTTGATCATCATGTAATAACATGCATGATGGATGATTGCTAAATTTGAAATAATAAATTAGGACAACCATGTGATGTGAACACTGTATTTCTTCCTTTCCGTTGCTTTTGCACGAGAAAAGACGTGAAATGCAACGATGTCGTCCTTCAGGACAATGACATGATAAAGGCAATCATCGACTTTGTCTCCGAGTCCACAACTGAAAAACTGGTAATCGGTGCACCTTCATCTAAAGGAGGCTTTGTCTGGTATATAATAATTATCATTATTCTTTTGATATGGAAAACGTTTTAATCTTATCGAATATAATTTCTTAATGAAAGAATGAATGAATGAAATGGAACATGAATAGGAGAATGAAATCATCGGATTACACAGCAGCCGTATCAAAAGGGGCGCCAGATTTTTGCTCTGTGTATGTGATCTCAAAAGGAAAAGTGTCATCCTTGAGAAATGCAACCCGAGCTGCTCCAGTAATGGCGACACATCTTAAGCACCAAATGACTCAAGTCAAGCCCCCTAGCAGTATCAAACATGATAGCAACAGCATTAATCGTTTTCAGCCAAGAGCCGGCCTTCCACCACTGGATAATAGTCACAGCCCACGCAGTAGCACCGCCAGCAATAATGACAGAGATACATTCAGGCAAGTTTATATCCACTTTTACATTAATTTGCTTGAAAACTAACAAAAGGGAGTAACTGGTTAATAACAAATTTATATCCATGTAGTTTTGAAACGTTACGATGACACGAATATCATGTTTCAGGTCACCGTTTGCAAGAGGAGGAGGACGTGGACATAACTCAAAATATGGGGATTTTCCATTATTGCCGGATACAGACATATCATTTGTCGGAGGGAGGCCAAGCAATGATTTCATCAGCAGCACAAGCAGCTTTTATAACCAGAGGCTATCATGTCCTGAGAGCTTTGATCACAGCTTTGATATGTCCCAGCCATCATCGTCGTCCTATAATACTTCGTTTGCACCAACTCCTTCACATTACAATGGTAGCAGCAACAACAACGGCTACTCTTCTTCAAGCAGCTCTCATGGCAGCTCTTCCATGGTAATAATAACTAATGTCCATCTACCTATACATGTCAGATTATCTTAACTGCAAAGCATTCATGAATTAACATATTTGAACATACATACATGTAGGATGATGTTGAAGCTGAGATGAAGAGACTAAGATTAGAACTGAAACAGACGATGGACATGTACAGTTCAGCATGTAAAGAGGCAATTACAGCCAAACAGAAAGCAATGGAGCTGAACCAGCACAAAAAAGCTGAAGAGGAAGCAGCAGCAGGCACGATGGATAAAGAGAAAGCGAGGATCAGAGCAGCCAAGGAGGCTGCTGAAGCATCCAAAAGAATAGCAGAACTGGAAGCACAAAAAAGAATAAGTGCAGAAAAGATGTCCATCAGCAGCAGGTCGTCTTCATCCATGGATTCACAAGGCAAAAACGGCATGATGAACAGTCCAGGAGGAGGAGGAACCACAGATATCCGTTACAGACGTTATAGTATCGAAGAAATAGAAACTGCCACAGATAACTTCTCAGAAGAAAAGAAAATTGGAGAAGGCGGGTACGGACCTGTATACAGAGGCTACTTAGATCATACCCCAGTAGCCATAAAGGTCCTACGTCCAGATGCAGCACAAGGCCGGTCCCAGTTTAATCAAGAAATAGAGATTCTAAGCTGCATAAGGCACCCTAACATGGTCCTCCTACTAGGGGCATGCCCAGAGTATGGATGCTTAGTGTACGAGTACATGGCCAATGGAAGTTTGGAGGACCGCCTGTTCAGAAAAGGGAACACGCCTCCTATTTCATGGCAGCAAAGGTTCCGTATTGCAGCTGAAATAGGAACAGGCTTGCTTTTCCTTCATCAGACTAAGCCTGAACCCTTAGTGCATAGAGACCTTAAGCCTGCAAATATACTCCTAGACCGAAACTATGGAAGCAAGATAGCGGACGTCGGGCTGGCCCGTTTAGTCCCTCCAACCGTGGCTGATTCGGTTACACAGTACTTGATGACATCGACTGCAGGCACCTTCTGTTATATCGATCCAGAGTATCAGCAAACAGGCATGCTCGGGGTCAAATCGGACATTTACTCACTGGGCATCATGCTTTTACAGATTATCACTGCTAAGCCTCCTATGGGCCTGACCCATCATGTGGAGAGGGCCATTGAGAAGGGTACATTTGAGGACATGTTGGACCCTGCTGTGCCTGACTGGCCTGTGCAGGAGGCTTTGGCTTTGGCCAAAGTCGCGATTAAGTGTGCTGAGCTACGAAAGAAGGATCGTCCTGATCTTAACACTTACATTATACCTACGCTTAACAAGCTTAGGGACATGGCTGATAATGATCTCATGTCACGCCAACAGCAGCTTTATCCCCATCCTGCTTTAGCCATCAACCATGGTGCTACACCGAGACAGAGCCAGGTTTCAATTGAGGATACTATAAGCAACCCTCTTACAAGACATTCGGGCTATGAAAGTAGATCCAGTGGATCATCCTAACTAACGATGAAAGATACGATGACGTGAGACCATCTTGCACTGCTAGCATTAATGATGTTCGCTGCAGTCAACATACTTGCAGGCTCATCGTTTTGATATATCTCTAAAGCTACACTTCATGTATGTCATCATTATCAGAGAGGGTGAGATCAGTATGATTTACAATTGCAGAAATCCAAGTTGTTGATACATACATTTCACATTTAGTGTTTCTTGTTTTAAGCATTGTCATTTCTAAGGGGATAATTTCATTTGCAAATATGGATGGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008782816.1	2.1e-230	U-box domain-containing protein 35-like
Swissprot	Q8S8S7.1	6.3e-99	Serine/threonine-protein kinase
trEMBL	A0A8B7BPL5	1.5e-230	U-box domain-containing protein 35-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G24370.1	54.87	0.0	779		Protein kinase protein with adenine nucleotide alpha hydrolases-like domain

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
AfisC5G05804	AT2G24370.1	760	278	12	4	717	11	751	54.87	779
AfisC5G05804	AT1G16760.1	751	268	19	12	720	17	723	52.86	734
AfisC5G05804	AT1G78940.2	797	270	24	11	763	16	744	52.07	733

Ortholog group

Species	Genes
Allium cepa	g223956.t1
Allium fistulosum	AfisC5G05804
Allium sativum	Asa0G00131.1; Asa6G05735.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	446	699	137.9	3.5e-40

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0004674	F	protein serine/threonine kinase activity
GO:0004842	F	ubiquitin-protein transferase activity
GO:0016567	P	protein ubiquitination
GO:0006468	P	protein phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network