Detail information of AfisC5G06090


Location
GeneChrStartEndStrand
AfisC5G06090chr511203312751120334824-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_009420203.11.2e-45PREDICTED: histone deacetylase HDT2-like
SwissprotQ9M4U5.13.1e-35Zm-HD2b
trEMBLA0A6I9QMK58.5e-46histone deacetylase HDT2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G03740.137.841e-35 147HD2C;HDT3histone deacetylase 2C

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
--

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF12874.4zf-metDomain26228321.20.00025

Gene Ontology
AccessionOntologyName
GO:0046872Fmetal ion binding
GO:0005730Cnucleolus
GO:0006351Ptranscription, DNA-templated
GO:0009294PDNA mediated transformation
GO:0009944Ppolarity specification of adaxial/abaxial axis
GO:0010162Pseed dormancy process
GO:0016787Fhydrolase activity

KEGG pathway
KONameEnzyme IDPathwayPathway ID
-----

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.