Detail information of AfisC5G06094


Location
GeneChrStartEndStrand
AfisC5G06094chr511213579511121372137-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020246933.18.6e-239calmodulin-binding transcription activator 4-like isoform X2
SwissprotQ9FYG2.11.3e-170Signal-responsive protein 5
trEMBLA0A6I9Q9K01.2e-234calmodulin-binding transcription activator 4 isoform X1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G67310.143.281e-121 434Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag221341.t1; g221342.t1; g309597.t1; g532723.t1
Allium fistulosumAfisC5G06094
Allium sativumAsa4G05370.1; Asa4G05384.1; Asa4G05385.1
Arabidopsis thalianaAT1G67310.1
Oryza sativaLOC_Os01g69910.1; LOC_Os01g69910.2; LOC_Os04g31900.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03859.13CG-1Domain14127159.13.1e-47
PF01833.21TIGDomain42550133.82.5e-08
PF12796.4Ank_2Repeat58666828.21.9e-06
PF00612.24IQMotif77779515.50.0093
PF00612.24IQMotif80081922.94.1e-05

Gene Ontology
AccessionOntologyName
GO:0003676Fnucleic acid binding
GO:0006355Pregulation of transcription, DNA-templated
GO:0006950Presponse to stress
GO:0044428Cnuclear part
GO:0044444Ccytoplasmic part

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K21596CAMTA; calmodulin-binding transcription activatorEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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