result

Gene information

Detail information of AfisC5G06095

Location

Gene	Chr	Start	End	Strand
AfisC5G06095	chr5	1121733104	1121737994	-

Sequences

CDS

Protein

Gene

>AfisC5G06095
ATGGTGAAGAAAACAAAGGATCGTGTGAACCGTGTTGGTTTTGCAATATTTAGGAAACCTATTGACAACACATGCTATGAACAAAGGTCTGAAAACAGCCCACCACTTTGTCGAGAATCTGATGATCCAAATGCAGCTTGGTACGTTATATGCTTGGATGATAGTCATGCTTCCTTCTATTTACTTGTATGCTTTTCAATATACTGCCAATTTAATAACTACTTCCAATATACTTCATATGAATTGGAAAAAATATGTTACTCGATATTGGCTTTTCAATCTGAATCAAATTAATTTCACTTCTCTAGTTTGTCATTTATATCAAATATATATGGGAATGAAATCTTTCAATTTGAATACCATCATGATGCTAGGCCCTTTGTTAAGTTGATCCCAGAGAGGAGATTAACAATTTTTGAATAATAAGGACCATATTTTTATTATTTCTCTCATTTTTTAGCTATGCAATATAAGGTTGCAATATCTTGATATTGTGCTATTTTTATATCTATCTATTTTTATTAATTTTTTCAGTTTTGTACTGTTTGACATCAACTCTTCCTCTTTCTTGTTGCTTCTTTTGTTCATTCTTTTAACAAATGATGGTATCACTCACTTATATGCAGGATCTGGTGTCACAATTGATATCCAAACTTGTTATGCTGCAAGGATCATGGCTTTATATGTTCTTCCCTTCATGATTGTGCAACTGCCAAGTGTTTTTAGATTTCCATCTGGACATCGCCTAATGGTGTTGATTGCTTTTATTGCTTCAGTTTTACAAGTCATATCCTATTGTTTATCCTAGGTAACTACTCTTAGTGATTACATACTCAGCATTTTGTCTTTGCTTAGCATGAATGTGCTTTTCAAAATAAAAAAAAAGATTTTTTATCACTTTTGAATAATTCCCAATAAAATATGGGTGGTTTAGGAAAAGCTGACATATTGTCCCTTTGAGTTTGCATATACTTGCTTAGGTGCTAAGCTTATCACATTTCGATCAGACCTACCATACTCATCAGAAGAGATTATAAAAAAGCTCGACCTACTCGATGAAGAGGACATCTTAGGGTCTGGAGGATTTGGTACTGTCTACAAGATGGTGATGGATGACTCTAATGCTTTTGCTGTTAAAAGAATTATTTATAATCGTGCAAATCAAGATCAATATTTAGAGAAAGAGCTTGAGGCATTGGGGAGCAACAAGCATATAAATTTAGTAAATCTCAAAGGTTACTGCAGGCTTCCTACTGCTAAGCTTCTCATATATGACTACCTTGATTTAGGCAGCTTGGATTCTTATCTTCATGGTATGCACCATTGTACATGTAAGATACTATTTATTTGAATGTCTGGATAAATTCAACACTATTGAATTTTTTGTTATGATCATAGAAAGCGATAAAGGAGAACAACCTTTGAATTGGAATGCAAGAATGAAAATTGCACTAGGGTCTGCAAGAGGATTGGCATACTTACATCATGACTGTTCCTCAATGGATTGCTTCTATAGAAATAGATTTAACAGAGCAAGAAGTGTGCAAACAGTTTGGATGTGCAGGTTAGTTCTACTGAAAAAGACTTTCATCTTCACCATTAAACTTTTTTGTTTGAACAGTTTATGTCTTATTTTAATGATTGGTACCGATCTTGATAACCGGATTTCAGTTCAGCGTGATAAGACCTTTCATCATGTATTTGATAAAAGAAATGTGTAAAGAAGATATTTAAAAGATTTATCCTATGACTTTTCTCAGTTTACCACTTAAGAAAGATATTAGTTGGTTATGTTTCATTGATGATTTTATAAAATGTAAAGAATGAAACATCAACATTCCTAAGAACTTCCTCCAAAACAAATCAAATAATATTTCTACAATACAAGATTATGATTACATTGCCTTTCATCATATACATTAATTTTATTAAATAAAATGCATTTTAAACCTGAGTGTCACAGTGAAGCTGTAATAATTTGATTTCTTATAGCTAAAGTGATGACAATTCATTTAGGTACATTTCACTCCATTTTTCTTCTTATTTAATAAAAATATGCATCGCTATCATTGACAATAGTATAAAAGTTATGTTATTTATTTTCCATAATATTACAACTGTTATTTTGGAAATTTGTAAGGAGTTACATTCATCATATCCCCTCTTATTTAACATCTCAATGTCTCGCTTCATATTATTTTCATTTGAAATTATTGAAAAAACAAGAAAAAAAATAACTTACTCACAGATCCAATTGACAACATGAATGGTGGTCACAAAATATTTGTATAGGTCACATCTAGATAGTCAACATAGCAATTAAAATGTATAAACAGTCAGAATCATCCATTCATTGCAATGGAGAATCACATATATACTACCATAAACAAATTGGCAATACATATGCGATCTCATAGTATTCATACACATGTTTCATTGTTATTGAACTCTTGGTGTGTGATTACTATCAATACACCTCCTTATGTGTTAAGTATCTCAAGCCAAACATGTGGACATTGAAAGATACATAGCATATAATCTAGTTAAGCAAACATAATAGTACGGAATACACAATCTGCCCATAGTACTGAATACACAATCTGCACATAGAATGAAATCCAGTCAGACTTCTAACCCAGTTTTGATCTGAATATCTGTGTAAATTGAAAATTGTGTATTCGTTGGGGAACTATATAGGATGCATATAAAAATAGAACAATTTTTTTAATATGTGTTAATATAGAATATCGAGTTATAGATTACATGATTTTCATATATACATATATACATATATATATATACACATATATATACATATATATTGTTGATTGTTAAACTCGTTTGCAGGTAATTAGCTATTTCGAAGCGAAGACTGTCGACAACAAAGAACTATTGGTAATCAAGCAACGACATGAATTTAATTGTTATATATGTTGTCGTATTTTGTTAGTACCATTTGTGGAAACTTGTCTGTGAATGCTTGTAGTATGTGACTTATTTTGTTGAAAAACTACTATCGAATTGATTATGGATATTATATTTGATTGTGAGATTAGCATGTTTTTGCAATTATTTGAATATGATGATCATATGATTGATTGTTTGTATATACTTTTAGTAGCGTTTCAGAAATGCTATAGAAACAAATATAAACTAATATAAAAATTATACAGTTGCATTTTAAAAACGCTACTAAAATAAAAAAAAAAGCATATAAACAAAAAATGCAACAAAAAATGAAGACTTATGGTAGCGTTTTTTTAACCCTACAGAAAAAACCTATAGTTGCATTTAAAAGTGACTTTTGGTAGCGTTTTTTAAATCCTACAGAAAATACCTATAGTTGCATTTAAAAGTGACTTTTGGTAGCGTTTACTACAACGCAACAAAAAGTTTTAGACTGATCCGCGTATTATTTTCTTTTGAAAAATTAAACAATGTTGGAAAAATTTACCAACGCTTATAAGCGTCAGCATAGAAAATTAAACAATGTTGGATGGTTAATTTGCCAACGTTTATAAGCGTTGCTAAATAATATACACCAACATTTATAAGCGTTGGTGAATACAACCTTCCAACGCTTATAAGCGTTGGGAAACTAAACTCCCCAACGCTTATAAGCGTTGGCAATAAATTGCGACGCCCCTACAATGACGCTAATAAGCGTTGCTGAAACTATTGGCGACAGTTATACTCGTTGGGAATCACCTGTTTTGGTGTAGTGAGTTATGCCTTCTTTTGCCATTTGAAAGATGTACATATTCCTGCCACGAATCAGTGTTAATCACAAACACGTTGCCAGTAACTGTAAATTGGTCTGCCTTCTGACACTTATTACACAGTTATAACGAACATATCTGCATTTATATATCCTTTCTCCTGCTCTTTATTAGTAATATACATATATGATTTTGATTGCAGTGCGGCTGTCCATGGCTAATTTGAATAATACTCTCAGACGATGTGTTTCAAAAACTATACAGAACTTTGGTAGCATGATGCATCCCCCTCTGTCATCACAGTTCATGTCCGTACTCTCCACTTCTCCGATAAAGATGTGTCAGCACGCTTCAGCCAAAAATTACATACTCTCTGGTATGCTCTTCATTAAAGTCCACAATTTTTTCTCTTTATTTGACCTTCCCGTTAACTGTCCCAACATGCGCCATTGCTAAGCTTTCTCTGTTTACAACCTGTAGATCACAAAATACCAATGATTTCTTGCCCACTGAAACGGAAACATGCCTGCTCACGTAACCTTTAACCACATCTGCACGTGACATAGGAAGTCAGGATACTGACCTTACCACATTAACAGCTCATAAAATAGGTCCAAATTTATTAACGTGTTACTGTCCTCTTCAGGCTGAGTCAAGACGGAGTAATTGTACGCCAACGAATCGTGGAAGAACTTTAGACAATAAAAGGAATAAGAACGCGTCCAGACGGTGGAGCACTGTGCAAAACAAGTTCGTCAACCGACATCTCCACTCTTTGCTGGTTCTCACTGTTTGTAAACAATTTGCAACCTGTTTGTGTTATTCACTTTCAGCTCTTTGTTGCTTCAACCTTGTAGCTTCTGCTACCTATCATCTACCAGGGGTTTTAACATCACCCACCGTATGTATTCCTACCACTCTGTTCCATAAAAACAAGCACTGTAATAACAAATAGGTTTGTATTATGTATGAATATAGTGTCCTCTAATTTATTTTGGGAAAATGTTGGCAGATTTGGAGAAAAGAGTGGAAGTAGACCCACTACATTTGGAATATTGGAGGTATATGTGGATGGGGCACAAAGCGAAACAACAGAAGCTTTCAATACTTTAAGAACTGAGGTACTTGCATGTCTGAGATGTGACTGCATGAATCAGCAGGTTTCAATATAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008796642.1	7.3e-59	LRR receptor-like serine/threonine-protein kinase FEI 1
Swissprot	C0LGF4.1	2.2e-44	LRR receptor-like serine/threonine-protein kinase FEI 1
trEMBL	A0A8B7D1A4	1.2e-58	LRR receptor-like serine/threonine-protein kinase FEI 1 isoform X2

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G62710.1	70.42	7e-55	210		Leucine-rich repeat protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G06095	AT5G62710.1	142	42	0	80	221	290	431	70.42	7e-55	210
AfisC5G06095	AT1G31420.2	225	99	7	78	286	282	503	47.56	3e-45	179
AfisC5G06095	AT1G31420.1	225	101	7	78	286	282	504	47.11	8e-45	177

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03141.13	Methyltransf_29	Family	10	49	29.1	3.3e-07
PF07714.14	Pkinase_Tyr	Domain	105	218	58.8	4.5e-16

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0001578	P	microtubule bundle formation
GO:0001653	F	peptide receptor activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0004903	F	growth hormone receptor activity
GO:0007169	P	transmembrane receptor protein tyrosine kinase signaling pathway
GO:0005496	F	steroid binding
GO:0005524	F	ATP binding
GO:0005768	C	endosome
GO:0006468	P	protein phosphorylation
GO:0009507	C	chloroplast
GO:0009553	P	embryo sac development
GO:0009556	P	microsporogenesis
GO:0009611	P	response to wounding
GO:0009647	P	skotomorphogenesis
GO:0009664	P	plant-type cell wall organization
GO:0009729	P	detection of brassinosteroid stimulus
GO:0009742	P	brassinosteroid mediated signaling pathway
GO:0009826	P	unidimensional cell growth
GO:0009911	P	positive regulation of flower development
GO:0010103	P	stomatal complex morphogenesis
GO:0010224	P	response to UV-B
GO:0010234	P	anther wall tapetum cell fate specification
GO:0010268	P	brassinosteroid homeostasis
GO:0010584	P	pollen exine formation
GO:0019199	F	transmembrane receptor protein kinase activity
GO:0042803	F	protein homodimerization activity
GO:0043234	C	protein complex
GO:0046982	F	protein heterodimerization activity
GO:0048354	P	mucilage biosynthetic process involved in seed coat development
GO:0048366	P	leaf development
GO:0048481	P	plant ovule development
GO:0060548	P	negative regulation of cell death
GO:1900140	P	regulation of seedling development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network