result

Gene information

Detail information of AfisC5G06205


Location
GeneChrStartEndStrand
AfisC5G06205chr511433445511143345360+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010915216.11.8e-24protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 1
SwissprotQ6YW48.11.0e-13Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 1
trEMBLA0A835RLB45.2e-26GATA-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT4G26150.152.876e-1886.7CGA1;GATA22;GNLcytokinin-responsive gata factor 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00320.24GATADomain8812157.46.8e-16

Gene Ontology
AccessionOntologyName
GO:0000977FRNA polymerase II regulatory region sequence-specific DNA binding
GO:0001085FRNA polymerase II transcription factor binding
GO:0001228Ftranscriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
GO:0003682Fchromatin binding
GO:0006366Ptranscription from RNA polymerase II promoter
GO:0005634Cnucleus
GO:0005667Ctranscription factor complex
GO:0006355Pregulation of transcription, DNA-templated
GO:0007623Pcircadian rhythm
GO:0008270Fzinc ion binding
GO:0009416Presponse to light stimulus
GO:0009735Presponse to cytokinin
GO:0009740Pgibberellic acid mediated signaling pathway
GO:0009910Pnegative regulation of flower development
GO:0010187Pnegative regulation of seed germination
GO:0010380Pregulation of chlorophyll biosynthetic process
GO:0030154Pcell differentiation

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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