Detail information of AfisC5G06207


Location
GeneChrStartEndStrand
AfisC5G06207chr511434453151143454434-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020244405.11.6e-229histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like
SwissprotQ8VZ17.24.4e-160Suppressor of variegation 3-9 homolog protein 6
trEMBLA0A5P1FEU72.4e-219YDG domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G22740.154.444e-163 573SDG23;SUVH6SU(VAR)3-9 homolog 6

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag379046.t1
Allium fistulosumAfisC5G06207
Allium sativumAsa4G05283.1
Arabidopsis thalianaAT2G22740.1; AT2G22740.2; AT2G35160.1
Oryza sativaLOC_Os09g19830.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02182.14SAD_SRADomain724882157.12.2e-46
PF05033.13Pre-SETFamily908100361.01.3e-16
PF00856.25SETFamily1022115477.71.2e-21

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0000790Cnuclear chromatin
GO:0000792Cheterochromatin
GO:0006306PDNA methylation
GO:0007275Pmulticellular organism development
GO:0010200Presponse to chitin
GO:0010216Pmaintenance of DNA methylation
GO:0018024Fhistone-lysine N-methyltransferase activity
GO:0033554Pcellular response to stress
GO:0031048Pchromatin silencing by small RNA
GO:0034968Phistone lysine methylation
GO:0044764Pmulti-organism cellular process

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11420EHMT; [histone H3]-lysine9 N-trimethyltransferase EHMTEC:2.1.1.355 Lysine degradationko00310
Longevity regulating pathwayko04211

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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