Gene information

Detail information of AfisC5G06258

Location

Gene	Chr	Start	End	Strand
AfisC5G06258	chr5	1159314689	1159315096	+

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020244437.1	1.1e-33	probable LRR receptor-like serine/threonine-protein kinase At3g47570
Swissprot	C0LGP4.1	4.1e-14	Probable LRR receptor-like serine/threonine-protein kinase At3g47570
trEMBL	A0A6I9RYL1	1.2e-18	probable LRR receptor-like serine/threonine-protein kinase At3g47570

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G47090.1	41.80	1e-17	85.1		Leucine-rich repeat protein kinase family protein

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G06258	AT3G47090.1	122	60	4	1	122	893	1003	41.80	1e-17	85.1
AfisC5G06258	AT3G47570.1	120	59	4	4	122	897	1004	40.00	8e-17	82.4
AfisC5G06258	AT3G47580.1	122	64	3	1	122	895	1005	38.52	9e-17	82.4

Ortholog group

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	3	34	20.5	0.00021

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0022625	C	cytosolic large ribosomal subunit
GO:0003729	F	mRNA binding
GO:0004674	F	protein serine/threonine kinase activity
GO:0004888	F	transmembrane signaling receptor activity
GO:0005618	C	cell wall
GO:0005768	C	endosome
GO:0005774	C	vacuolar membrane
GO:0006955	P	immune response
GO:0046983	F	protein dimerization activity
GO:0008219	P	cell death
GO:0042802	F	identical protein binding
GO:0009416	P	response to light stimulus
GO:0009506	C	plasmodesma
GO:0009555	P	pollen development
GO:0009620	P	response to fungus
GO:0009734	P	auxin-activated signaling pathway
GO:0009742	P	brassinosteroid mediated signaling pathway
GO:0010233	P	phloem transport
GO:0010305	P	leaf vascular tissue pattern formation
GO:0031224	C	intrinsic component of membrane
GO:0032989	P	cellular component morphogenesis
GO:0044237	P	cellular metabolic process
GO:0048518	P	positive regulation of biological process
GO:0048580	P	regulation of post-embryonic development
GO:0048657	P	anther wall tapetum cell differentiation
GO:0051606	P	detection of stimulus

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network