result

Gene information

Detail information of AfisC5G06269

Location

Gene	Chr	Start	End	Strand
AfisC5G06269	chr5	1161448267	1161449896	+

Sequences

CDS

Protein

Gene

>AfisC5G06269
ATGGACATGATGCTTGTGAAAAGTGAAATGCTGAATGAAAATAAAAGGAGAGTTCTAGGAGTGACTGCTGCTGCTTCTAGTGAAGTGAAACAAATTAAGAGGCGGAGAAGAGAGTCTGCATTGCCTGCTGTGGTAACAGCAGGGAGTAACAAAGATGGAATAGTAGAGCAGACAACTGGTACCACCGTTAAACGGAGCTCTAGGTTTCGGGGTGTTAGCAGGTAATTAATTAGCCTATAAATATATTTCTTTAAGTAAATGGATATTAACATTTAAAGCATACAATTAATATCAGGCATCGATGGACTGGTCGATATGAAGCACATTTATGGGACAAAGGGTCATGGAATGCAACACAAAGGAAGAAAGGAAAACAAGGTATATTCTCAATCCTATCACTAAATTCAATGTAAGATACAGTGTATAATATATGTGATGGAAAATTTGCATTTTAGTTTATCTTGGTGCATATGATGAGGAAGAATCAGCTGCAAGAGCTTATGACCTTGCCGCTCTCAAATACTGGGGACCTACCACCTTCACAAATTTCCCTGTATGTAGTTTAGTTTAACTCAACTGTGCTTCACTACATGATTTCATATAAATCAAAATGCTTCAATTATTTCAGGTGACAGACTATGAGAAGGAAATTGAAATAATGCAGACTGTTACCAAAGAAGAGTACCTAGCCTCGTTGAGAAGGTATGATAGATTATTATTAATACTTTGCAACAACTGAACATTATTCAAGCACTTTAAACTTTAGCTCTTGCTGGCTTCATGTATCCTTCAAGGTTTCTGAATCTTAACATAAATTGTTTATAGGAAAAGTAGTGGCTTCTCAAGAGGAGTATCCAAGTATAGAGGAGTTGCAAGGTTACTGTTAATCAAAATTATTCTTAAATTATTGTTCAAGATGATTTTTACTAAAAAGAAAAATTGTTATGAACTCGACGACAGGCATCATCATAATGGAAGATGGGAAGCAAGAATAGGACGAGTTTTTGGGAACAAATATCTCTACCTTGGAACATACAGTAAGCAAGCTTGCTAAACAAAAGACATATTACAGAATTTTATATATATCAAATTTAAATAAATATTCGAACCAGGTACTCAGGAAGAAGCTGCACATGCATACGACATTGCAGCAATAGAGTACAGAGGAATCAATGCAGTGACCAACTTCGACCTAAGCACATACATAAGATGGTTAAGACCTGGATCTACAACCAACAATATAAACATAAACCTACAAGAGCAGAACCAGAACAGTGCCTTACAGTTTCACACTACCCTACAACCATCCAATAATTTCCCTACAAACGTAGACCCTCAACCACCGCTACCGATACAAACAACTTTCCAGTTAGAAGAGTTGCAAGTGCCATGCAAGCAAGAGTTAGTTTCTCTTCAAGCTCAAGGCAGCAAGTCATCTCCTACTGCTTTGAGTCTTCTGCTTAGGTCCTCTGTGTTTCAACAACTAGTTGAGAAGAATTCTAATGTTGGGGATGAGGAAGAGAGTAACAATGGACTGATGTATGAAGGGATAGAGATTGAAGAGAGTGATAATGTGTATTATGAGAAGAACGATGGTGGTATTTGGAATGGTGTTATGGGTATTCAGTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020242611.1	9.3e-128	LOW QUALITY PROTEIN: AP2-like ethylene-responsive transcription factor At1g79700
Swissprot	Q6X5Y6.1	2.3e-78	Protein WRINKLED 1
trEMBL	A0A8B7CZZ6	9.1e-117	AP2-like ethylene-responsive transcription factor At1g16060

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G54320.1	78.89	2e-78	289	ASML1;ATWRI1;WRI;WRI1	Integrase-type DNA-binding superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G06269	AT3G54320.3	180	38	0	58	237	55	234	78.89	2e-78	289
AfisC5G06269	AT3G54320.1	180	38	0	58	237	55	234	78.89	2e-78	289
AfisC5G06269	AT1G51190.1	219	79	2	19	232	136	354	61.64	6e-75	278

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	67	126	47.1	1.9e-12
PF00847.17	AP2	Domain	169	220	44.6	1.1e-11

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0000723	P	telomere maintenance
GO:0000976	F	transcription regulatory region sequence-specific DNA binding
GO:0000981	F	RNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0006110	P	regulation of glycolytic process
GO:0006355	P	regulation of transcription, DNA-templated
GO:0009414	P	response to water deprivation
GO:0009651	P	response to salt stress
GO:0009734	P	auxin-activated signaling pathway
GO:0009737	P	response to abscisic acid
GO:0009744	P	response to sucrose
GO:0009873	P	ethylene-activated signaling pathway
GO:0010073	P	meristem maintenance
GO:0010093	P	specification of floral organ identity
GO:0010187	P	negative regulation of seed germination
GO:0010449	P	root meristem growth
GO:0019432	P	triglyceride biosynthetic process
GO:0019827	P	stem cell population maintenance
GO:0019953	P	sexual reproduction
GO:0030154	P	cell differentiation
GO:0040008	P	regulation of growth
GO:0045723	P	positive regulation of fatty acid biosynthetic process
GO:0048316	P	seed development
GO:0048481	P	plant ovule development
GO:1901959	P	positive regulation of cutin biosynthetic process
GO:1904278	P	positive regulation of wax biosynthetic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09285	OVM, ANT; AP2-like factor, ANT lineage	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network