Detail information of AfisC5G06276
| Gene | Chr | Start | End | Strand |
|---|
| AfisC5G06276 | chr5 | 1162664368 | 1162674166 | - |
| Database | accession number | e-value | annotation |
|---|
| nr | XP_020100376.1 | 2.2e-262 | FACT complex subunit SSRP1 |
| Swissprot | O04235.1 | 4.7e-241 | Recombination signal sequence recognition protein 1 |
| trEMBL | A0A6P5FVL8 | 1.6e-262 | FACT complex subunit SSRP1 |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT3G28730.1 | 68.67 | 0.0 | 864 | ATHMG;HMG;NFD;SSRP1 | high mobility group |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| AfisC5G06276 | AT3G28730.1 | 648 | 197 | 5 | 1 | 645 | 1 | 645 | 68.67 | 0.0 | 864 |
| AfisC5G06276 | AT3G51880.2 | 81 | 45 | 1 | 549 | 628 | 41 | 121 | 43.21 | 6e-10 | 63.2 |
| AfisC5G06276 | AT3G51880.3 | 81 | 45 | 1 | 549 | 628 | 41 | 121 | 43.21 | 9e-10 | 62.4 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF03531.11 | SSrecog | Domain | 76 | 291 | 258.9 | 2.7e-77 |
| PF08512.9 | Rtt106 | Domain | 349 | 442 | 82.2 | 2.5e-23 |
| PF00505.16 | HMG_box | Domain | 561 | 629 | 83.6 | 8.7e-24 |
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| K09272 | SSRP1; structure-specific recognition protein 1 | EC:- | - | - |