Detail information of AfisC5G06285


Location
GeneChrStartEndStrand
AfisC5G06285chr511637604831163765934-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK59409.12.8e-74uncharacterized protein A4U43_C08F6130
SwissprotQ9SYG2.11.1e-14Trihelix DNA-binding protein ASIL1
trEMBLA0A5P1FDY91.4e-67Myb_DNA-bind_4 domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G24490.142.177e-49 191Alcohol dehydrogenase transcription factor Myb/SANT-like family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag190513.t1; g257348.t1; g45509.t1; g457184.t1
Allium fistulosumAfisC5G06285
Allium sativumAsa3G03240.1; Asa5G03529.1; Asa6G02812.1; Asa8G01838.1
Arabidopsis thalianaAT3G24490.1
Oryza sativaLOC_Os01g52090.1; LOC_Os01g52090.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13837.3Myb_DNA-bind_4Domain9718471.74.4e-20

Gene Ontology
AccessionOntologyName
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005730Cnucleolus
GO:0006355Pregulation of transcription, DNA-templated
GO:0009733Presponse to auxin
GO:0009793Pembryo development ending in seed dormancy
GO:0010029Pregulation of seed germination
GO:0010431Pseed maturation
GO:0044212Ftranscription regulatory region DNA binding
GO:0043565Fsequence-specific DNA binding
GO:0048831Pregulation of shoot system development

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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