result

Gene information

Detail information of AfisC5G06534

Location

Gene	Chr	Start	End	Strand
AfisC5G06534	chr5	1211252099	1211254809	+

Sequences

CDS

Protein

Gene

>AfisC5G06534
ATGAGAGGTAATAAACGCCCTACTTCTCCTATGCATCCCAAATCTATTGGTGTATGCCCTGGTTCTCCAAATATGTGCCCAGGTTCTCCAAAACTAAGGTGTGACGATATGAAGAGCCCTCCTCATCCACTCCCTCTTCCTCCAGGCTCACTCGGGTCTTCTTCGAGGTCAAATACTAATACTCAGTTGAGTCCTTCACAATGGAAAAAAGGGAAGTTGTTAGGAAGGGGAACTTTTGGTCATGGTATATAGGGTTTAATAGGTATCGTTTTTATTTTGTTCTGCATTTCATTGGTTAGTTTTGTATTAAGTTAGTGTTTGTATATTAATTTTTTGAGCATTAAACTTTTTAAACCACTATAAAATATATCTTCAAACTGCACTAATATGACACTCTAACACACTGTATAGATACATTCTTCTCCCATACCAAAAAATTCTTCGTAGTTTCTGATGGAGGGGACAGTTTGTGCATATAGTCCGTATAAACTTTGTCAACATTAATTTTACTGTTCCACTATAATCACAGTAATGCAAACTGATAAAAACGATCTGGTTTTATTGTTTGCTGTAGAGAAAACGGGTAGATGTGTGCCATTAAGGAGGTCAAGGTTATTTCAGATGATTCAAATTCAAAAGAATGTCTCAGGCAATTAAACCAGGTAAGTTATTTTGTTATCTTGGGGGTGCGATATTGGATTTTCATGTCCAAAATTGAAAGTCTTGTTTGATTGACATTCTTTATGCAATTTTTACACAGGAAATAACATTGCTTAGTCAGCTATCACATTCGAATATTGTGCAATACCATGGCAGCGAATTGGTAACTTTTGAACTAACTAAAATCGGATTACACAAATTACATGCTTCCATCAGTCATCAGTGAATTGTGTTTTATTCCGGAGTCTAGCTACCTAACTGTTATTTATTTCACTTGGATCATGATGATTTTAGCATTGTCTTCTATAAAAGTGCATAGGTTCTTGATACCATTTTTAGAATGTCATTGAGACCAACATATTCGTGGGATGCTCAGTCTCCCTATGAGATGATTGTTTCATTGATTCATTCTCATCCTTCTAGGCAAAATATCAAGTAACGGGATTGATTCAGTTACACCTTTCCAATGGAAAATGGATTCAGTTCATTTGTCTATAGGCTAGTTCCAAAGGAAAATTAAATCGTCTAACAAATCACAAATTTCTTGATACAGGCCGATGACACACTGTCAGTGTACCTTGAATACGTTTCAGGTGGATCCATTCACAAATTACTTCAGGATTATGGTCCTTTTGGGGAGCCTGTAATACGTAGTTATGTTAGGCAAATACTTTCAGGACTTGCATATTTACATGGGAGAAATATCGTACATAGGTATTACATTGTTTCCGTTGAGGTTACATAAAAAGGTTAATATTGTTCCTCAAGTTAACGTTCATGAGTGATTTTTGCAGGGATATTAAAGGTGCAAACATACTTGTCGACCCTAATGGTGAAGTTAAGCTTGCTGATTTTGGCATGGCCAAACATGTAAGCTGTCTCTTTTATTATTTTGCAGGGATAATTTGGATATTTTTTATACTTCTGAGAAAATATGCATTGATTCCGCCACACGCTTAGGGTAATTACCAAAGACATGTATGCCAACTTGTGACATTTGCTTTCAATTAAATGCCATGCCACACGACTATCATTTGGGCATATATCATCACCTTTTATTGTTTAATTACAACTCAATAACAACCTTTACCATCTGATATATCACTATAATATCCTTTAACAATTTATCCAAACTCTGCATTATGACATAGGCATTTAGGCATTTAGTGCCATTACTACTACCTGTCCAGCTGTGCTCATTGCTATGTTGCAAGCCCAATTTAGAAGACCTGGTAATAATGTGTGTAAAAGTTAAAATGTTATGGCGTCTATGAATCCATAATTCGAAGTAAAATAGCTTCATAATAACAGTTGAATACAAAATATTTTTCTTTACAGTATTATAAGCTTTAATGATAAGTTGATAACTACACTTACACTTTCTAAGGGATTTGTTTCACCTTCTTTGCCATAAGAATGATGAAAATTTTGAATGAGTATATTCCCTAAATTATTTACAATTTTATTTTCTCCTTCCAATAATTTACTCCTTAACCTTCTTTTTTCCACTGCTTCCTGCCGAATTTATCTTGAGACCAGTCTCTTAATTTCCTCCTAAAACATCGGATTTGTTAATATTTCACAAAACAGTGTAGGGGTATGGTGGTGGTAGACAGTGTAGGGGTTTGTGGAATAGGGAACAGTTGAATGAGTTGTGGCAGTTGAATGAGTTGTAGTCACTGGTGGCTGTTGGAGCGGTTGCTGCAGCAGATGGTTGGAGAAATGTATGGCAAAATGTTGGAGTGTTAGAAATGCTTCAACAGATGGTTGCTGCAACTGAGAAAAGTGAGGTTAACATTGCTTTAATCTATTTTCCATATTGGGAAAATAGATCAGTAGAAATAACCAATTGTAGTTTCTAATTCATGCAGTTCATGCACTTGCTTTAATGTTTGTACACTGTAATGAAAAATATATATCACATTTCTATCTGAGCATGCACTTGTTTTAACATTTTCTGTTTCTTTGTGTTAACTTCGCAGGCTTATTTGGAAGGAAGCAAGGTCCTTAGTACGCAACTAGATCAGATCTTGCATGTTGGAACTCTGTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010930645.1	2.2e-67	mitogen-activated protein kinase kinase kinase 3 isoform X1
Swissprot	F4HRJ4.1	1.8e-55	MAP3K alpha protein kinase
trEMBL	A0A6I9RZ25	1.6e-67	mitogen-activated protein kinase kinase kinase 3 isoform X1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G53570.1	56.76	8e-57	217	MAP3KA;MAPKKK3	mitogen-activated protein kinase kinase kinase 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC5G06534	AT1G53570.4	222	58	4	6	195	148	363	56.76	7e-57	217
AfisC5G06534	AT1G53570.1	222	58	4	6	195	148	363	56.76	8e-57	217
AfisC5G06534	AT1G53570.3	222	58	4	6	195	148	363	56.76	8e-57	217

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	85	195	112.4	2.2e-32

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0000747	P	conjugation with cellular fusion
GO:0000919	P	cell plate assembly
GO:0001568	P	blood vessel development
GO:0005829	C	cytosol
GO:0004702	F	receptor signaling protein serine/threonine kinase activity
GO:0005634	C	nucleus
GO:0009524	C	phragmoplast
GO:0009793	P	embryo development ending in seed dormancy
GO:0010098	P	suspensor development
GO:0010103	P	stomatal complex morphogenesis
GO:0010229	P	inflorescence development
GO:0019236	P	response to pheromone
GO:0035420	P	MAPK cascade involved in innate immune response
GO:0043123	P	positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043622	P	cortical microtubule organization
GO:0046777	P	protein autophosphorylation
GO:0048046	C	apoplast
GO:0071323	P	cellular response to chitin
GO:1900150	P	regulation of defense response to fungus
GO:1900745	P	positive regulation of p38MAPK cascade
GO:2000071	P	regulation of defense response by callose deposition

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network