Detail information of AfisC6G00198


Location
GeneChrStartEndStrand
AfisC6G00198chr62830681628333473+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK81569.12.1e-82uncharacterized protein A4U43_C01F30650
SwissprotQ8VWK4.15.9e-61MYB transcription factor
trEMBLA0A5P1FWD71.5e-82MYB transcription factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G49950.150.611e-63 240ATTRB1;TRB1telomere repeat binding factor 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain55535.01.1e-08
PF00538.16Linker_histoneDomain12518341.31.3e-10

Gene Ontology
AccessionOntologyName
GO:0051276Pchromosome organization
GO:0000781Cchromosome, telomeric region
GO:0000785Cchromatin
GO:0003691Fdouble-stranded telomeric DNA binding
GO:0005730Cnucleolus
GO:0006357Pregulation of transcription from RNA polymerase II promoter
GO:0009651Presponse to salt stress
GO:0009723Presponse to ethylene
GO:0009733Presponse to auxin
GO:0009737Presponse to abscisic acid
GO:0009739Presponse to gibberellin
GO:0009751Presponse to salicylic acid
GO:0009753Presponse to jasmonic acid
GO:0046686Presponse to cadmium ion
GO:0033613Factivating transcription factor binding
GO:0042803Fprotein homodimerization activity
GO:0043047Fsingle-stranded telomeric DNA binding
GO:0070491Frepressing transcription factor binding
GO:1990841Fpromoter-specific chromatin binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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