result

Gene information

Detail information of AfisC6G00245

Location

Gene	Chr	Start	End	Strand
AfisC6G00245	chr6	34960869	34968002	+

Sequences

CDS

Protein

Gene

>AfisC6G00245
ATGTCAAACTGGACAAGAGGCAAAATACTCGGCCGCGGATCCACCGCCACCGTCAATCTCGCAACTGATTCAACTTCAGGCGAATTCTTCGCCGTTAAATCGACCTCTGTTTCAAACTGTAGTCTCTTACAGCGGGAACGAGTGATCCATTCCTCGATCAATTCTCCCTCCGTGATTTCTTATCTAGGGCACGAAGCGGATCACGAATTCTACAATATATTTCTGGAGTACGCTTCGGGTGGATCGGTGTCCGATCTGATTAAGAAGCAGAAGCTTGAAGAATGCGAAATCAAATCGATAGTGAAAGACGTCTTGCTTGGACTGAGCTACCTTCATTCCAACAAAATCGCGCATTGTGATTTGAAGCCACAAAATTTGCTGATTGTGGACGATGGGAGGGTGCAGATTGCCGATTTGGGATGCGCGAGGTACGTGGATGGCAATTTCGGGAATAAAGGGAAGTTTATGGGCACTCCTATGTACATGGCGCCGGAGGTGGCGAGAGGGGAGGAACAGGGCACCGCGGCAGATGTCTGGGCCGTTGGATGTACGATGATTGAAATGGCTACGGGGAGATCGCCGTGGGGCGAGGTATCTGATGCGGGTTCGTTTCTGTACAGAGTAGGGTTTACGGATTCCTTGCCCGAATCGCCCGATTGGGTTTCGGATCAGGGGAAGGATTTTCTAAACAAATGTCTGAATCGGGATTGGGAAAGTAGATGGAGCGTCGATGAATTGTTGACGCATCCGTTCTTATCGGGTTCGGACGCGGAGTCCAAATGGGTTTCGCCCAAAAGCACTCTGGACAGCTGCTTCTGGGATTCGTTATCCGAGTCCGAAGAAGAAGAACTGGAAAAAATAGAAGATTTGAGGCCCGATTCAATCGACATAGATGGGCTTTTCAGGTCAAGTGCGGGGCCCAGATGGACGTGGGACGACAGCTGGTTGACCGTACGGGCCGACGATGACGTGACGGCGGTGGAAGGCACGAGTTCGTCGGTTGATGAATCATTGATTAATAACGGTGTGACTATTAAAAATAATGTAATCAGTGAAAAAAATGACGTGGGTCTTTTAAGACCGGATGAGTTGTGTTGTTTTAGATCTGTCGTTAGTGATAAATGTGAAATGCATGAGGATTCTAAATATGTACGCATGTTTTCTGGCTGCTTCGTAATTTTTGAATTTTTGAATCTGTTGGTTTGTTTTTTAACTTTAATTCTCATCTGTTTACGAAGAGTTTTTTTTCTTCTGGAACCACTGTGTTTTTTCTAGATGCAACACGTGGAGGCTTTAGAAAGTCAACTTCATACTGGGACATATTATTTGTCTACAGTTACAATGGACATTTGTCTGCAATTACATTCACTCACTTATTTATCTGTGTTTTCTAGATTATATAAGCACAGATCTACGAGGGTGGAGAATACAATCACATTGTTGAGTGGCCCATGAAATTACATCAAATTTTGGTTGGCTTACGCTGTCAAAACCTCTGCTTTATGCTGTCATTCAACTACTACTTTTTTTTTTATCACTACTCGTGCCAGTTTTATGATTTTTTAGTGCTTCAGAAACCTGTAAATTTTACGATATTTAAGAATTTTAAAAGCGAATTTATGTGCATTGAAGTGCAGTATCTAGCGTATCAAAAGCATGTATGAATGTTTTCATTGTTTATGAACGACAATCAGTTATATTTCCCATTCAAATGAACGTGTATGTATGTATGTATAGTGAATTCTTTAATTATTGGTGCTGCCCTTTCTGTTAAGATTTATATAGATGGCGTACACTGCCGTTGATATTATTAGCATTGGTAAACATAGGACCGTATTCTAGTTTTTTCTAAGGGGGATGTAGCACAGGATTGAGGATATCCTTCGGAATATATATTATCCTTCCCATGTTGGTTTGGTTGATGGAACAGCCTTTCTCTCATATCTTTGGATTGGCTCTATATGAACCAAGTATCATCACAATTAATCATGAATATATCAGTTTCATTCGCATTAACGTGTAGCGCCCAAGACGTGTTCAAGATGGGGTTCGTCTGACGCAAATGGTAAATTTCAAAAATCCCTTCTTCAAACGGTAAAAAACACACATATATAACCAACTTATTTCATCTTCTTTCTCACCACAGCAAACCAAAAATTCTGAAAATTCAATCAAAAATCAAATTTTGCATAAAGCAGAAGCTTTGAGGTAATTTTTGTTATATTCTTATTTATCTCATTTACATCTATGTTTCACTTTTTTATATATTTATTTTAAGCTTTTTTGAGCTAAAAAATGGTTGAAGCTGCTATCTGTAATGACCCGACTTTTGACTCTCGAATGTGGCACTAGATACATCCACGGTATTAGTGTGCCGAGCACTCAAGTGCCAGAAAGACAGAAAGTTAGGATAAAAGTACAAAGAAAAGAAGAATAGAACAAAAAAGAGAGAACACAACATCAGAATCTCACAACAAAACGATAATATATAATAACAAAAGAACAATTCAAAAGGTTACTTTAAGTACTGAAATTTCAGAGTTACTAAAACCTAAGTATTATCATCAGCCTGGACAATTATAACTGTCCGTCCTTACAATATTGAAATATACAATACAGAAATGCAGCAGAAATAACAATACTACGAAAGATAATTATCCAGCTCTTCTCCATAAGCTCCAAGGCATCCGTAACTAAATCTGAAAATATATACGGGGCTAACCCGAGCATTATAAGAAAATAACACCCTGATCAGTTTGGCAAACCAGCATGAGAAACTCAAAAAATAAGGGTGACATATAATAACACCTTTTTGAGACTGGACGGATTACCATAACGGTTTTTCTCTCAAATGAAACCAACCATTCATTAAGTTTAACATACAGTGATATGATAGATAATGTCTAGTGTGTAGTACATAAATCATATCAAATAGCTGTTGTGTGAACGTCACAATAATAATGGGTATACAATCAATACTGCTAAGGCGTATTCGCATAGGGACTGTCTTCCGCAGAGACGCCCCCAATAAACTGAAGCGGATCTCCATGACAAGGATCAAAAACTTCCTTCCGAGCATCGTATATCTCTAGATAGGATATACCCTAAGGTAAACACAACTGGCCCAACGATGAACTGCATGGCACCAAGTATCAACAACTCCCGCACGTAATATAGTGGCAAGCATACTCTAGATCTGGAATTGATATACCCTCATAGGTAAGCTAAACCCGAGACTGTGCATCTTCCTTTGGTTTTAGTCATTTCCGATGTTAGGGCTACGTTCGGCATCTTTCGCATGAGTTTTCACCACTTGAGCAGCATACGAATCACCAATTGGATTTCTTCATCTCGAACGGATCACGAATCACTATATGGATTCGAGCATCTTGAATTGATCTTAAACCCCCACATAGGTTCCCCACATAAGTCCTTCGACGAATGCTAACACTGTCATCTCTCTTGGAATATCCCTTAAGATAGACAATCCCCCACGATGGCATCGTTCGAAATGTTAATGCTCGAAATGTTAATGCTGACCTTTCCTTTAGACTTAACCTTGGGATAAACAATTCAACTCTATAACATTCCACTTCACAACCGCTTCTAGAACATAGATCGCATATATGGTTTTGAAGTGATTACGGGTTTGAGTCATCTTATATAAGTACAGTCTCCCCAATTATCGGACTCACCAAAACCAATTGATGAATTACCGATTAACTCAATTCCGGTTTTCTCAGAAGCAAACGAAAGCTAGAGGCGTTTTATACCAATACTCCTCCCAGAGTGTTCTTATAGGTATGAAATCGTGAAGCCTTTTAACAACTTCTTAGGTCAATATTTTAGGTTAGGATCAATAACCGATTAATCGATTATATAGTCAAAACAATTGCTTATACAAATCAATATTCATATGCTTAACTCCTTTCCGACATTCCAACTTAACTATTCCTCGTCCAAGAGTGAAGCCAGGTAAGTTAGAACACTAGTTGCATCAAAGCCTTGCCTAGACTTTAATTCTTGAATCTTACAAATAGATAAGTCTACCTCGTCGGCTTTTAGTGTTAAGTACAGTATTAATGATTTCCATAAACAAGTAAGAAATCAACATGATTAACACGTTTTTCACATATCCGACTTACTATTTCTCGGTCAAGAGAGAAGCCGGTAGGTTAGACCTCTATTGCTCCATCCCTACTCGAACATCAATCTTAACTGTCACAAATTGATAAGCCTTACTTCATCGGCTTTTAGTGTTAAGCATGGTTAATTACTTTTCAAACAAGTAATTAAACAACTAACCATTTGACCATTAAACAATTCCTACCCCTTTTCGAAAAATTGGTATATACTTTTAAAATACTTGAAAATACTTATAATAGGTTTTAAAATGTTTGTTCAAAAAATTACTTTAAAATAACAAGTTTATAGAATTCTTTGAAACTCGGATAGAACATGTTTTCTATATATTTTAACAAAATATCCATTTTTCTTGAATTATTAAAATTCATAAAGATCTCAAACCACTTTTAAAATGCTCTAATAATAGTTAGTAAACACTTATAAAAAGAATGAAACAAAATACTTAAATTTAAATATCTTTTCAAACCTTTTAAGTTCAAAATCAAGTCTAATTAGGGCAGCTTTGCACAAGTGAAGTTTTGATCACTTTTCAAGATGTTACTTAACTTTTTACTATCTAAGTTTTTAATGCAACAAACATACATATAAAACATTATAAGTATGGCGAGAAACCCCTAAGGATTGTAAGTTTGCGGAATAGTGATCTTAATGCTAATTTAACACTGGAGGAGAGTGAATAGTGTTTTCTAATTTTTATGATTCTTTTTTAATTCTTTTAAGATTATAGTTTAAATAATGCAACTAACCATTACAGATTCAAACATAGATAAATATAAATGTAGTAAAAGTAAAAAGGGAAAGAACACACAAGGATTTTATACTAGTTCGGATTTACCCTACATCCAGTCCCGTATAATTTCTTGTGCAGATTTCATTTCAAATATCAAAGCAAATACAATCTCGATTTCAAGGTAACGAGACACACCCTCCAGACTTTCCGACTCTGGGTAGGGTCACTTGATTTACACGGGCTACAAGTACCCCACTAGATTTTCGGGCTACTAAGCACACCCAATTGATTTACACTGGCTACAGTCATACCCACTTGGATTTCAAAGATGTCAAACACACCACAAAGTATAAGAGTATGATTTGACAGAGTTTAGAGACTCAGGTTCATGATGTTCAGTACAAATGATCCTATAATATCTTGAATAACACTTTGATCTTGATGTCAGTAAGAGAGTAGAGAGAGATCAATGAGTAAACAATAGAGAATCAAATCAATGGAGTTTGGATTTGCTTCTGATTGAATTTGAGAAATTTGGGTAGAATTTCATTTAGAAAACAAGAGAGTAAAAAGATGAGTGAAATCTAAGAAAGTAGTTAATAAAAATTCGTTGTTTAACCCCTATTTATAGAGAAACAACAGTCATGTCCATTCACAAAGAGATACAACGAAAAAACATTTCCATTCAAAATTTGAATTTTTAAATTTTTGGTCTATATGTCAATATACATGGATAAGATATGTCGACATATCCCTTTGTATTTTGAAAACACTTTATTTTAAATTGTTTTGAATATCTTAAGTTTTGTAAAATATTTTGATACTTTGTAAAATCATTTAAGCATTGTTTATACACATTTTAATCATAATAAAACTTGAGAAATCTTTATAAAATAATATTGAAATATTTTAATATATAAAGGATTAAATATAATTTTCTAAAATCAAGGCATTAATGAATGTTATAATTATACTATGAAATATTTTAATATATAAAGGATTAAATAATATACAAAAGCAATATATGAAGTATAAGCGAATATATATTAAAATCAAGGCATTAATGAATGTTAAAATTATACTTTGAAATATTAAAACATGAAACCAAAAACAATATCTAAATATAATAAACTAAAAGTATATTAAAATATAAAATACTTAAAAACTTAATTTCTCAAAATATGATAATTTTGTAAATAAATAATTAAAAGGTTAGAATTCTTTTGAAAGCTATGCGAAAAGATGTTTGAAAAATTATTTTTGATAACAGGGATTATTTTTGAAAACTGGGATATTTGAAAATAATTTAAAATCAAAGAATAGATTTTAAAAACCTTTTCGAAAAATGAAGAGAGATCAAAGAAGTGCTATTAGGATTTTAACAAAATAATCTATGACTCTATAACTTATCTGGATATCTTGAATCTTCAATGCTCGTGAGTCCTCAATCTCTATATCAACCTCTTGGCTCTTCTTTTGATATTGAATAGTCGTCTTAATCAGCACCTGTTTAATATCCTGCACGATATATGACTTGATAAAAAAATCGGTGTCTATATTTTATATAATCATATATGGTTGTTGTCATCAAAACCAATACCCAAGTTACTAATAAGGATCTCTCTACAAAGTTTCATAGAAATCACCGAATACAAGACAATTTCGAAATGCATCTATAGCAACTATCGCTATAAGTACACTTTCAAATCTAAGTTCAATCTAAACCAAAGTCTATATATAACCTATGTGCTTTATTCAAGGTCTTGTCACAAGTCATACAAGTTCATTCAAGTCCATTCCAAGTCCATAGATATGGATCACATATGCTTCTTGTTTTCAAAACAAGAATCAAACCAATGTTTTTAACAATGTCAATAGCAATTCAACAAATTAACACAATCAAAACATAACATATACATGTTATATTTTTCATTCAAAGTGAGGTGTTAACTCACCTTTAATCCAACAAACAACCAAGATCCAGGAACCCAAGTCCAAATCCAACTTGCGACCACCTTGCCACCTCTTCCTCCTTGCTTTACACACTTGCTTTCTCTCTCCAAACCACCCTATTGCTCACGGCCATTCCAAATGGGGAGTGCATGGCTTTGCTTCTTCAACTTTTGGCATAGTGGAAGGTGTTATAATATTGTACTAAGGCCTGTGGCAAAGTTTGAAGTGATTTAGAGTTGATTTGCAACTATTTCATTTAGAGCATAAGAGAGAAGGAAGAAGATGAAGCCATTAGAAAAGCTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010916795.2	3.3e-93	LOW QUALITY PROTEIN: mitogen-activated protein kinase kinase kinase 18
Swissprot	O80888.1	2.8e-65	Mitogen-activated protein kinase kinase kinase 17
trEMBL	A0A8K0MWL9	6.2e-94	Mitogen-activated protein kinase kinase kinase 18

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G26890.1	46.07	3e-78	289	MAPKKK16	mitogen-activated protein kinase kinase kinase 16

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G00245	AT4G26890.1	369	154	10	3	333	4	365	46.07	3e-78	289
AfisC6G00245	AT5G55090.1	371	163	12	3	336	5	368	44.20	3e-74	275
AfisC6G00245	AT2G32510.1	314	144	7	4	300	3	311	47.13	2e-69	259

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	5	252	196.2	5.8e-58

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0000747	P	conjugation with cellular fusion
GO:0000911	P	cytokinesis by cell plate formation
GO:0004702	F	receptor signaling protein serine/threonine kinase activity
GO:0009793	P	embryo development ending in seed dormancy
GO:0010098	P	suspensor development
GO:0010103	P	stomatal complex morphogenesis
GO:0010200	P	response to chitin
GO:0010229	P	inflorescence development
GO:0031347	P	regulation of defense response
GO:0043229	C	intracellular organelle
GO:0043405	P	regulation of MAP kinase activity
GO:0043410	P	positive regulation of MAPK cascade
GO:0043622	P	cortical microtubule organization
GO:0044444	C	cytoplasmic part
GO:0045860	P	positive regulation of protein kinase activity
GO:0046777	P	protein autophosphorylation
GO:0048046	C	apoplast
GO:0051054	P	positive regulation of DNA metabolic process
GO:0071310	P	cellular response to organic substance

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K20716	MAPKKK17_18; mitogen-activated protein kinase kinase kinase 17/18	EC:-	MAPK signaling pathway - plant	ko04016

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network