result

Gene information

Detail information of AfisC6G00442

Location

Gene	Chr	Start	End	Strand
AfisC6G00442	chr6	57706677	57708014	+

Sequences

CDS

Protein

Gene

>AfisC6G00442
ATGTCGATAGTTGCGAGTAATTGGGGAGGTGATGCTCGATTTGGTGGTTTTCGAATTGGTAGGTTCGTATAGGTATGACAGTGGAGAAGTTAGTAGATGTTGATGAAGGATGACAGTTTGTAGTGGATGGCAATTTGTTATGATCAGGTGTTGATGCGGAGCACTGGAAATTGGCAGTGCCTGAACTGGTATTGGGGGTGTGATGTTTTGATGAACTGAATGTTTGTGGAGGTAGTGGGAGCAGTGGAGGTGGTGGATTTGTTGCTGTTAGTAGATCTAAAAGCAGGGGAAGTTTGAGATGTTGTTGAGAAGTGTGATGTGCAGGACTTGGGTGGATAGGCAGTAGTTGAGTTTGAAGTTGAAGTTGGTCAATGTGTTCAGAGGGGATGATGGCAGTGTTTTGACTGTTTGCAGAAGTTTTTTGCCAGAGAATGTTGTGAGGAAGTTAATTTATGTGAGGTAGATATGTTGTAGATGAACATCCAGTGAGGTAGATACAGAAACAGTGCGCGTCCAAACCGAGTCACCGGAGCTGGATTCTGGAAAGCAACAGGAACTGATAGACCAATTTATTCCTCTGAGGGTAATAAATGTATAGGGCTAAAAAAGTCGCTTGTATTTTACAAGGGTAGAGCTGCAAAAGGCACAAAAACTGACTGGATGATGCATGAGTTCAGACTTCCTTCTGTCAATGATTCATCCTTCCCTAAAAGACCCCTCGAGAAGACAATTCCCATCAATGTATGACTAATTGATTATATGTTATGCAAAATAATGAGCGTGTGTGTGTATCTTATGTCCAACAGAAGTTGACATATTTTGGTTTTGAAATATTTGCAGGAAGCATGGGCTATTTGTAGGGTATTCAAGAAAACAAACCCTGTGGCTCATAGAGGGATATCTCAGTCATGGGGATCGCAATTTCAAGAAATAGCCGCTACTGAATCGGACATGTTTCCAATTTTTGAAACCATACGTGCAAATCAGTTACTTTTATCAGACCCTGAACCATCTTCATCTTCGAGCCAGTTCAATGTCCCTGCTATAGAATTTGATCTGCCCAATTTTGCATTTTCTCAGGAAGATGTGCCACTGGATTCTATGCTACGTAGCTTTAGTCAGACTCCACGGAATAATGAATTAAGGGTTGATTTGCCTTTGATATTTAATGACGAGATAAGATCAAACACTGACAGGGTTGTTGACAACAATACACAGGGGATTAGCTTTCCATTCAATTTGTCTCTTGTTATATCTCAAGACTGGAGATTGAATTTTCTGTGGGAATCACCTGCTTTATCTAGTGAGATATCTACTGGATTTTCTACAAGTGTATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020255504.1	1.3e-62	protein FEZ-like
Swissprot	Q9ZVH0.1	7.1e-42	NAC domain-containing protein 9
trEMBL	A0A5P1F6X4	9.2e-63	NAC domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G39820.1	66.39	1e-39	160	anac094;NAC094	NAC domain containing protein 94

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G00442	AT5G39820.1	122	27	4	18	125	84	205	66.39	1e-39	160
AfisC6G00442	AT1G26870.1	121	42	1	18	137	87	207	64.46	4e-39	158
AfisC6G00442	AT3G12910.1	113	45	3	18	125	86	196	53.98	2e-28	122

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02365.12	NAM	Family	26	81	37.3	3.4e-09

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0005992	P	trehalose biosynthetic process
GO:0006561	P	proline biosynthetic process
GO:0009414	P	response to water deprivation
GO:0009644	P	response to high light intensity
GO:0009718	P	anthocyanin-containing compound biosynthetic process
GO:0009723	P	response to ethylene
GO:0009733	P	response to auxin
GO:0009737	P	response to abscisic acid
GO:0009753	P	response to jasmonic acid
GO:0009825	P	multidimensional cell growth
GO:0009835	P	fruit ripening
GO:0009962	P	regulation of flavonoid biosynthetic process
GO:0010014	P	meristem initiation
GO:0010016	P	shoot system morphogenesis
GO:0010029	P	regulation of seed germination
GO:0010120	P	camalexin biosynthetic process
GO:0010199	P	organ boundary specification between lateral organs and the meristem
GO:0044212	F	transcription regulatory region DNA binding
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0042538	P	hyperosmotic salinity response
GO:0042542	P	response to hydrogen peroxide
GO:0042803	F	protein homodimerization activity
GO:0043068	P	positive regulation of programmed cell death
GO:0043565	F	sequence-specific DNA binding
GO:0045770	P	positive regulation of asymmetric cell division
GO:0045995	P	regulation of embryonic development
GO:0046982	F	protein heterodimerization activity
GO:0048103	P	somatic stem cell division
GO:0048317	P	seed morphogenesis
GO:0048527	P	lateral root development
GO:0048759	P	xylem vessel member cell differentiation
GO:0048829	P	root cap development
GO:0051091	P	positive regulation of sequence-specific DNA binding transcription factor activity
GO:0080060	P	integument development
GO:0090400	P	stress-induced premature senescence
GO:1900056	P	negative regulation of leaf senescence
GO:1900057	P	positive regulation of leaf senescence
GO:1901348	P	positive regulation of secondary cell wall biogenesis
GO:1902074	P	response to salt
GO:1904250	P	positive regulation of age-related resistance
GO:1905393

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network