result

Gene information

Detail information of AfisC6G00447

Location

Gene	Chr	Start	End	Strand
AfisC6G00447	chr6	57989699	57992348	-

Sequences

CDS

Protein

Gene

>AfisC6G00447
ATGGAAAAAAATGCCAGGTTCGGGAAGGTGTTCTCATCAAATTTATTTGGGAAGAAGGTTATACTTTCAGCAGATCCAGAGTTGAATCGATTTGTCATGAAGAATGACATAAAAATGTTTGCACCAGCTTGGCCGCATAATTTGAACAAATTGATAGGGGAGAAGTCCATATTTTTAGCAGTTGGAGAAGCACATAAGCACATGAGATCGACCATGGTACAATTTCTAAGTAATGAAAAGATGAGAACTCGGTATTTGAGAAATGTGGATAATATTGTTTTGCTCATGATGAATTCTTGGAAAGAAAATGCAGTGTTTTCCGCTAAGAAAGAAATAACCAAGGTACACGTTTCACGAATGATGTTTATGCATGGTTGTAGAATATATTGAATAACAAAACTGGTTGCACAAAAATTATGACATGATGCATATTCAAAGGATAGTAACTATGTTGTCATGTCCAGCATAATTAAGGAATGAAGTTTCACGACAGCATGGGAGAAAAAACTCAACAAATGATCACTAAAACATATATGATTAGTTTTTAGAGATAATAAGCCATTTTGTCAACTAAGTTTACCAATAACTACAAATTTAAAAGGTTAAAAATGTGTTTTTCCCCCTTTTTTTCTTGACAGTTTTCACTATCTGTCGTGGTAAAAGAGATACTAGGCATGAATGGTGAGAATCCAGTAGTCGAGAAGTTGCAGGAAAATTTTGATTTGCTTGTAAGAGGAATGACTAGTTTACCTTTATACTTTCCTGGAACTCTATATTGGGAAGCTTTCAAGGTGATAAATTCTATATGTATATATACGAGGGATCTCTATAATGGGAACTCTCGTACCATATTAAAAATGCATGAAACGATGCAGTAAAAGATGGAACCTTCTAAACACCAATTTATATATAGGAATGAAATATTTCTTGGACAGTAAATAATTTAAGCCATATGATTTTAGATAGATTTAAATAATTAATGATTCTGTCAAAACAATATATAAAAATATGTATGATTATACCATCATTATTTTTTAATCTTGATTCTTTGCATGTTACTCCACTCAATTATTGGAAATATAAATATGGACCAATTTAAAATGTAGATTTTGTAATCGTGAAAACATCCATGAATAGTATTGAAGTAATAATAGTAAAGGCAGTGTGTGGCAAGTAATCATACCAGACCCTTGTTCATATATGTATATATGTATATGTATATATGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATGTATGTATGTATGTATGTATGTATGTATATAACTTTCAGATTACATGTTATCATTTATTCTAAATTGTGTTATATTTTCAAATGGTGAAGTCAAAAAGAACCGTCGACCAAATTTTCATGAGGGAAATTAAGAAAAGAAAGACGTACATGGGCAATGAAATCTGCAGAATTCATGTACAAGATTTTCTCGGGCGGCTAATCAGCATCAACTACTCGGAAGAAGGTATTCTTGACATGTTGAGAGGTTTTCTTCTTGCAGGACATGATGACGTTTCAAGAGCAATAACCGCTATGATCTATTTTTTACATGGATGCCCATTAGCAACTAAACAATTACGGGTAAGTTCAATGTAAAAAACAGAAAGCTTTTGTTCGTTTATAGATAATTCAATCACACGACATTTTTCCATCAATTGAATGAAAATACTAAGTATTGATATTTTGTATATTCTGTGACTGAAAAAACTTGATTATTTTGATTATGAAGATATTATATATATATTTTGAAAAGACAATTCCTTCCCACAGGAAGAGCACTTGCAAATTAAAAGCTCAAAGAAGCAAGAAGCAGATAAAATAATAACATGGGATGACTACAAGGGTTTGGAATTCACAAAATGTGTAAGCTCGTACAAGTATATTAAAAGATATTTTGACATTCTGGTATAAAAAAATCCATTTGTATAATACCACTTCCTAATATGATATGAACATGAAGGTCATTAATGAAACACTTCGACTGTCCAATACTGCTATCGCTGTTCCAAAGGTGGCAATTACGAATGTGGAATTTAAAGGTACGGTCAAGATATTAAAGAATATTTATTTATTCAGCCATATTAAAAAAAATTGATCTTTTTTATTTCAAACTGTTTTAGGTTATCTAATTCCAAGAGGTTGTGATGTAATGCTACACCATAAATCTGTGCATTTAGATCCATCACTATATATCAATCCTGATCATTTCAATCCATGGAGATGGCAAGTGAGTTCTCACTTCGATTGTGTTATTAGCTTAAACATTTCAATTGTATTTTTAACATCAAAGAATCAAACTGATCATACTGAGTAATAATTGAGCCTTAAAAGAAGGGGGAAAATATAGTTATCTTACTTTTACTCGACTTCGCTGTCTTTGGCAGTCAATATCCAACATTCATATGTCAAACACCTTTATGCCATTTGGCGGCGGGGTTCGACAATGTCCTGGTTCAGAGTTAGCAAAATTAGAAATGACAGTTTTTCTTCACCATTTTATACTGAGATACGACTGGGAGCTTGTAGAGCCAGATCATAACCATCCTCTGAGTTCGGCGGTTGTGGAATTCCCTAATGGTTTACCAATTAAAGTCACAGAAATTTCATCAGAAATTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020261199.1	6.6e-114	cytochrome P450 90B1-like
Swissprot	Q5CCK3.1	1.3e-93	Steroid 22-alpha-hydroxylase
trEMBL	A0A097PA02	8.9e-113	Cytochrome P450

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G50660.1	40.05	2e-95	346	AtDWF4;CLM;CYP90B1;DWF4;PSC1;SAV1;SNP2	Cytochrome P450 superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G00447	AT3G50660.1	442	231	6	5	414	73	512	40.05	2e-95	346
AfisC6G00447	AT5G05690.1	394	237	7	2	391	62	447	36.80	7e-70	261
AfisC6G00447	AT4G36380.1	419	267	6	2	414	100	512	33.41	1e-67	254

Ortholog group

Species	Genes
Allium cepa	g261874.t1
Allium fistulosum	AfisC6G00447
Allium sativum	Asa8G04236.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	5	394	204.0	3.4e-60

Gene Ontology

Accession	Ontology	Name
GO:0016020	C	membrane
GO:0005783	C	endoplasmic reticulum
GO:0006950	P	response to stress
GO:0009639	P	response to red or far red light
GO:0009687	P	abscisic acid metabolic process
GO:0009826	P	unidimensional cell growth
GO:0009911	P	positive regulation of flower development
GO:0010224	P	response to UV-B
GO:0010268	P	brassinosteroid homeostasis
GO:0010584	P	pollen exine formation
GO:0016132	P	brassinosteroid biosynthetic process
GO:0016709	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
GO:0020037	F	heme binding
GO:0048366	P	leaf development
GO:0048657	P	anther wall tapetum cell differentiation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network