Detail information of AfisC6G00582


Location
GeneChrStartEndStrand
AfisC6G00582chr68142520681429779-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020260084.11.9e-193tubby-like F-box protein 8
SwissprotQ75HX5.13.8e-170Tubby-like F-box protein 1
trEMBLA0A5P1F3I71.4e-193Tubby-like F-box protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G25280.168.548e-170 593AtTLP10;TLP10tubby like protein 10

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
--

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00646.30F-boxDomain519940.51.6e-10
PF01167.15TubDomain115419317.54.1e-95

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0005515Fprotein binding
GO:0016021Cintegral component of membrane
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005576Cextracellular region
GO:0005829Ccytosol
GO:0016567Pprotein ubiquitination
GO:0005634Cnucleus
GO:0005929Ccilium
GO:0006355Pregulation of transcription, DNA-templated
GO:0008081Fphosphoric diester hydrolase activity
GO:0009536Cplastid
GO:0009555Ppollen development
GO:0009620Presponse to fungus
GO:0009651Presponse to salt stress
GO:0009682Pinduced systemic resistance
GO:0009723Presponse to ethylene
GO:0044212Ftranscription regulatory region DNA binding
GO:0035091Fphosphatidylinositol binding
GO:0042542Presponse to hydrogen peroxide
GO:0061512Pprotein localization to cilium
GO:0071470Pcellular response to osmotic stress

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K19600TULP1; tubby-related protein 1EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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