Detail information of AfisC6G01023
| Gene | Chr | Start | End | Strand |
|---|
| AfisC6G01023 | chr6 | 154173040 | 154200810 | + |
| Database | accession number | e-value | annotation |
|---|
| nr | XP_020259633.1 | 2.4e-264 | zinc finger CCCH domain-containing protein 24 |
| Swissprot | Q8L7S3.1 | 9.1e-216 | Zinc finger CCCH domain-containing protein 24 |
| trEMBL | A0A8B7C4E2 | 3.0e-248 | zinc finger CCCH domain-containing protein 24 |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT2G28450.1 | 49.02 | 0.0 | 807 | | zinc finger (CCCH-type) family protein |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| AfisC6G01023 | AT2G28450.1 | 863 | 337 | 13 | 22 | 857 | 23 | 809 | 49.02 | 0.0 | 807 |
| AfisC6G01023 | AT2G28450.2 | 863 | 335 | 14 | 22 | 857 | 23 | 804 | 48.67 | 0.0 | 793 |
| AfisC6G01023 | AT3G21300.1 | 363 | 195 | 11 | 277 | 624 | 153 | 461 | 27.27 | 8e-20 | 96.3 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF00642.21 | zf-CCCH | Family | 85 | 112 | 27.7 | 1.6e-06 |
| PF13847.3 | Methyltransf_31 | Domain | 564 | 628 | 43.2 | 2.9e-11 |
| PF05958.8 | tRNA_U5-meth_tr | Family | 750 | 793 | 24.1 | 1.3e-05 |
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| K15332 | TRMT2A; tRNA (uracil-5-)-methyltransferase | EC:2.1.1.- | - | - |