result

Gene information

Detail information of AfisC6G01045

Location

Gene	Chr	Start	End	Strand
AfisC6G01045	chr6	156767080	156768365	+

Sequences

CDS

Protein

Gene

>AfisC6G01045
CTTACTTAACGTTCAAGAAATAAAATGCGAAATAATGAGAAAATAATAGTCGCAAAACCTGTCCCATTGAGACCTTTTACCAGTCAAAGATCATTTCCAAACCTTACTGCAAATCAACATTCATCAACAACAGTTCCAGTTCCAAATCCGACGTTCATAATCAAGCCAAAGTCTGTAAGGTTAAAGACCTTGGTGAAAGATTCTCAACTGGATTATGCTATCGTTCAGGTTCTTCTATTTTTCCTTCCATCTTTAAAAGCAGGTGTATATTATAAGCTATTTTAGATGCTAAACCATGCTTATTTTAGGATGAAACCATGCATCAAAGCAGTTCAGCACATGTACAGCCAGAACTAGTTCATCAAGACGTAGAACAAGAGCGAGATAAAACATCGTATGATGGTTATAATTGGAGAAAATATGGGCAAAAGCTAGTGAAAGGAAGCAACAATCCAAGAAGTTACTACAAATGCACACATCCAGCGTGTCTGGTGAAGAAAATAGTTGAAGCAACATTTGATGGTAAAACCACCGAAATTGTTTACAAAGGAGAGCACAATCATCCAAAAACCAAAACATCTAAAGATCATTCCAATAAATTATTTGAAGGAAACTCAAATCATCATCTAACCAAAAATTGTGATATGGCCGATGACCTTCCCAAATCCAGAAAAAAGTAAGCAGATTTAAGTTTCTAAATTATATATTTAATATTTTCTGTATAGATAGATAGTATTTGGTCCAGTGGTCCTTACTGCTACAAATATATGCTAATATGAATTCAGTATTTTTAAACACAGACGATGTAATTCAGATGGCTTAGTGGAAAGCTCAACAGAGCCACAACTTTCAAAGGATGGTTTTCGCTGGAGAAAATATGGGCAAAAGATTGTGAAAGGAAGCTCATACCCGAGGTAAAAAACATAAGAGTTCAATCGATTGAATATAAAATGCTATTTAAAGAATGAATATACAATAGATGCTAAAAATATATACGTTGTTTTTTGGTAGGAGTTATTTCAAATGCAGTGATAAAAAGTGCAACGTTCGCAAGCATGTAGAGAGAGCATTAGATGATTCAAAATCTTTCATTACCACATATGAAGGAACGCACAACCATGAAATGCCTGACAAAGCTATTGATTCTACTACTACATCCGATGCTGATACCATAATGATTCATTCAGACTTTTAATTTTGTTGGTTGGAAGCTTATTTGAACTAAACCATGATGTATTCAGTCTTCTTCCATATTTTGTGGTTTAATAGCAACTTATTTTCATAAC

Functional annotation

Database	accession number	e-value	annotation
nr	AUG71566.1	5.1e-161	WRKY transcription factor
Swissprot	Q9ZQ70.1	2.9e-44	WRKY DNA-binding protein 3
trEMBL	A0A2H5AHW3	3.6e-161	WRKY transcription factor

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G07100.1	47.03	2e-47	186	WRKY26	WRKY DNA-binding protein 26

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G01045	AT5G07100.1	202	97	2	82	273	92	293	47.03	2e-47	186
AfisC6G01045	AT5G07100.1	73	38	0	213	285	116	188	47.95	2e-13	73.2
AfisC6G01045	AT2G03340.1	258	100	7	65	273	218	474	41.86	3e-47	185

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03106.12	WRKY	Domain	99	154	82.0	2.7e-23
PF03106.12	WRKY	Domain	214	271	87.1	6.6e-25

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0042742	P	defense response to bacterium
GO:0050832	P	defense response to fungus
GO:0005634	C	nucleus
GO:0009737	P	response to abscisic acid
GO:0010228	P	vegetative to reproductive phase transition of meristem
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0034605	P	cellular response to heat
GO:0043167	F	ion binding
GO:0051607	P	defense response to virus
GO:0070301	P	cellular response to hydrogen peroxide
GO:1901002	P	positive regulation of response to salt stress
GO:1990837	F	sequence-specific double-stranded DNA binding

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network