Detail information of AfisC6G01086
| Gene | Chr | Start | End | Strand |
|---|---|---|---|---|
| AfisC6G01086 | chr6 | 164731556 | 164732244 | + |
| CDS |
| Protein |
| Gene |
| Database | accession number | e-value | annotation |
|---|---|---|---|
| nr | XP_010922390.1 | 3.1e-12 | zinc finger protein ZAT11 |
| Swissprot | Q9LFG0.1 | 4.3e-11 | Zinc finger protein ZAT18 |
| trEMBL | A0A6I9R8N8 | 2.2e-12 | zinc finger protein ZAT11 |
| TAIR id | % identity | e-value | bit score | gene aliases | Short description |
|---|---|---|---|---|---|
| AT2G28200.1 | 37.39 | 4e-25 | 110 | C2H2-type zinc finger family protein |
| Species | Genes |
|---|---|
| Allium cepa | g455386.t1 |
| Allium fistulosum | AfisC6G01086 |
| Allium sativum | Asa8G05241.1 |
| Arabidopsis thaliana | AT2G37430.1 |
| Oryza sativa |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|---|---|---|---|---|---|
| PF13912.3 | zf-C2H2_6 | Domain | 44 | 68 | 44.0 | 1.3e-11 |
| PF13912.3 | zf-C2H2_6 | Domain | 86 | 111 | 38.8 | 5.7e-10 |
| Accession | Ontology | Name |
|---|---|---|
| GO:0003700 | F | transcription factor activity, sequence-specific DNA binding |
| GO:0005634 | C | nucleus |
| GO:0006355 | P | regulation of transcription, DNA-templated |
| GO:0006979 | P | response to oxidative stress |
| GO:0008270 | F | zinc ion binding |
| GO:0009408 | P | response to heat |
| GO:0009611 | P | response to wounding |
| GO:0009631 | P | cold acclimation |
| GO:0009643 | P | photosynthetic acclimation |
| GO:0010200 | P | response to chitin |
| GO:0010224 | P | response to UV-B |
| GO:0044212 | F | transcription regulatory region DNA binding |
| GO:0042538 | P | hyperosmotic salinity response |
| GO:0043565 | F | sequence-specific DNA binding |
| GO:0045926 | P | negative regulation of growth |
| GO:0071289 | P | cellular response to nickel ion |
| GO:2000280 | P | regulation of root development |
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|---|---|---|---|
| - | - | - | - | - |