result

Gene information

Detail information of AfisC6G01165

Location

Gene	Chr	Start	End	Strand
AfisC6G01165	chr6	175224919	175228149	+

Sequences

CDS

>AfisC6G01165
ATGGGTAATTGCTGGAGTGTGAGGATCAAGTCTGTGAATACTAGCAGTAGTCTTCCAACTTCAGCTGCAACTTCTAGGAGCAGCGGAAAAAGATTAAGTGGGTCAAGCAGTAGGCTTTCATCATCATCACTTCCACCAACCTCTAGAAGCGAAGGAGAAATCTTACAATCGTCGAATTTGAAAAGTTTTACTTTTAGCGAACTCAGGAGCGCTACTAGAAACTTCCGTCCTGACAGTGTTTTAGGAGAAGGAGGGTTTGGTTCTGTATTCAAAGCGTCAAAGCCTGGAACTGGAATTGTTATTGCTGTGAAAAGGCTCAACAAAGAAGGGCTACAAGGTCATAGAGAATGGTTGGCGGAAGTAAATTACCTGGGTCAATTCTACCATCCAAATCTTGTAAGGCTGATCGGATATTGCATGGAGGATGACCATCACTTACTTGTTTACGAGTTTATGCCCAAAGGGAGCTTGGAAAACCATCTGTTTAGAAGGGGTTCTAACTTCCAACCTCTTTCCTGGAAACTCAGAATGAAGGTGGCACTTGGAGCTGCAAAAGGACTTGCATTTCTACACAATGCCGAAAATAAAGTTATATATCGTGATTTTAAAACCTCGAATATTCTTCTTGATTCAAACTACAATGCAAAACTGTCTGATTTTGGTTTGGCGAAAGATGGCCCAACTGGTGATAAAAGTCATGTCTCTACTAGAGTAATGGGAACGCATGGATATGCAGCTCCTGAATATCTTGCCACAGGTCATTTGACTACAAAGAGCGATGTATACAGCTTTGGAGTAGTCCTTCTAGAAATGATCACAGGCAAACGTGCAGTTGACAAAAACCGCCCAAACGGTGAACAAAACTTAATAGAATGGGCAAGGCCTTATCTTACTAACAAGCGCAAATTCTTTAGGGTAATAGACCCTAGACTTGAAGGGCAGTTCACGATTGAAGCAGCACAGAAGGCGGTTGCGATAGCTGTGCAATGCTTGAGTGGGGATTCTAGGTACAGACCTACTATGGATGAAGTGGTGATTTCACTACAAGAGCTTAGGAAAATGAAGGAGAATTCTAATGGTAAGAGAGAGGTTGGTAATAGGAAAGTACCTTATCCTATACCAGCGCCCTCCCCTAGGGTACATAGAGTTTAG

Protein

Gene

>AfisC6G01165
ATGGGTAATTGCTGGAGTGTGAGGATCAAGTCTGTGAATACTAGCAGTAGTCTTCCAACTTCAGGTTTTTTTAATTCACTTGCTCTTTCTGTCTTATATTCCACCTTTTTCACATTTTGATGAAGAGGAAGCATCCTGATGCTTTTTCGCTGGAATTTAGGCAAATTTTAATCTGACGACCAATACCATGTAAGGTTAAGTAAAAAATTTGCATTGAAGTGTTTTATTCTCTTAACAAGCTAAAACAATTGATCATTATTTGGTAAATCGATCTGTTTGCTCCTAATTTGAGAAATTCATAGGTCTATTTTGATTTTTGATGGATTTCTGACTTTTCTGAACATGAATTTTATCATGACACAACGGATTACAAATCATCTATTGACTGTGGGGATTTAGTTATGAAGGTGTATTCTACATAATTTGATGATTTATGATAGGACTAAAGAAGAGATCTAAATCACGGAAGAAAGGATCTGAAAATATATTCGATCTAACGAAAATTATGATTCAAAGATTGAAAATTATGTAAAATGGGATTTCATGAAAAAAGCTTGTTGGTGTCTTGATCACGACGCTTGATTCAATGAAATCATGTTAGATTACGTAATGTATACTCATAAATATTTTCATTCTGTTACATTGTAGCTGCAACTTCTAGGAGCAGCGGAAAAAGATTAAGTGGGTCAAGCAGTAGGCTTTCATCATCATCACTTCCACCAACCTCTAGAAGCGAAGGAGAAATCTTACAATCGTCGAATTTGAAAAGTTTTACTTTTAGCGAACTCAGGAGCGCTACTAGAAACTTCCGTCCTGACAGTGTTTTAGGAGAAGGAGGGTTTGGTTCTGTATTCAAAGGTTGGATTGGATGAACAAACTCTTGTAGCGTCAAAGCCTGGAACTGGAATTGTTATTGCTGTGAAAAGGCTCAACAAAGAAGGGCTACAAGGTCATAGAGAATGGTTGGTATGTATCTTCTTACCTCAAGAATAGAATGCGGTATTTCTTAATATTGAAGTTTGTATACCTAGAAGATAAGTTAGCAGGTTGTATAGATGTGCAATTTACGAATTATTGATATCATGCCTTGGGTTATTTGCTGTGTAGTATCTAAATGGTGGGTTATGCTAGTCAACAAGTAGTCGTAAGTTGAATTTGTTAGTTGTTTAGAGAACTATTTGTCTATTACAAAACTATTTGGCAGGAAAACTAGTCATTTTTATACATGAGTAGATATATCTATCGTCATTTTCCGGTTCAACAAGTTATCGTGTTTGTATGACCACCCATGTAATGGATATTTCTCAGCTAACATGTTAGAGAACAATTTATTCATCACAATACTGGTTGGCATTTAGAATATTCTTAATTTGTATACATCATGCCTACAACTTTACACAGACAATTCCAAACAATATATATCTTTGGTCAGTGGTCACACCAGTTGATGGATCATTAACTAAATGTCATTGTAAACGGTTAAGTTTGGTATTGGGTTCTTGAATCATAAAGTTCATAAGATTTTTGTACAGAATAAGGTTGGGATTGAAAGGTTTAGGTGTTATTATTTGCACCATTAGTTTATTTCCTGTTTATGTTTGATCAGTGTCTCTTTGTAGATGGTACTTATTCTTATGATGTTGCTATATTATGATGCATTACTAGATTTATTGATGTACTCTAATACTTGTTGACTCTATTTATTGATATGAAGTACTGAACATTAGGTTATAGCAAACCAGAATGCACATTAATATCTTCATATACTATTTAAGTAAAGTCATATTAGAAGGGAAAAAAAAAACTAATTCTTTTTCTTATTGCATCGAAAGGCGGAAGTAAATTACCTGGGTCAATTCTACCATCCAAATCTTGTAAGGCTGATCGGATATTGCATGGAGGATGACCATCACTTACTTGTTTACGAGTTTATGCCCAAAGGGAGCTTGGAAAACCATCTGTTTAGAAGTAAGCTTATGATGTTCAAATTTAAATTAATAGCTGAAATTTTGAAATAAAATCCTGAAGGCAAGGACTACGTTACATAATATAATTTATAATATTTTGCTGCATAGCATAGTCATAGTAAATTGAAAAAGCATTTTGCGAAATAACGGTCTGCACTCTTTAGTATTCAGGCCATAATGTACATATACGTTCATGCATCCAATGCCATCATTTTATGAAATTTATGCTTTGTGTATCTCGATTTGTAAAAGCCATTGTATTTAACTGATATTCATATATAGAGATTAAGTCCCTTTTCCGTGTCAGAGAGGGCATAAGTTATTGTTATTAGCCTATTTACCTTTAGTAATTTCCTAGCAAATTTGGACATACTGAAAAAAGCGAATGCACGTTGTATAGCTGTTCATGTTATCAATGCATCTAACTGAAATATTATGCTTACAGGGGGTTCTAACTTCCAACCTCTTTCCTGGAAACTCAGAATGAAGGTGGCACTTGGAGCTGCAAAAGGACTTGCATTTCTACACAATGCCGAAAATAAAGTTATATATCGTGATTTTAAAACCTCGAATATTCTTCTTGATTCAGTAAGTGGACCATAATCACCATTATTAAATTTAAAAACAAACGATCTTGATCTAGTGTACAGTTTGCTCATGTGAATGTCATGCAATTTACAGAACTACAATGCAAAACTGTCTGATTTTGGTTTGGCGAAAGATGGCCCAACTGGTGATAAAAGTCATGTCTCTACTAGAGTAATGGGAACGCATGGATATGCAGCTCCTGAATATCTTGCCACAGGTAAAAATGCATATAAAAGTCTACCCGATAAGTTTCATAGCTATAGTTAACGTTGTTGTTACAGGTCATTTGACTACAAAGAGCGATGTATACAGCTTTGGAGTAGTCCTTCTAGAAATGATCACAGGCAAACGTGCAGTTGACAAAAACCGCCCAAACGGTGAACAAAACTTAATAGAATGGGCAAGGCCTTATCTTACTAACAAGCGCAAATTCTTTAGGGTAATAGACCCTAGACTTGAAGGGCAGTTCACGATTGAAGCAGCACAGAAGGCGGTTGCGATAGCTGTGCAATGCTTGAGTGGGGATTCTAGGTACAGACCTACTATGGATGAAGTGGTGATTTCACTACAAGAGCTTAGGAAAATGAAGGAGAATTCTAATGGTAAGAGAGAGGTTGGTAATAGGAAAGTACCTTATCCTATACCAGCGCCCTCCCCTAGGGTACATAGAGTTTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020252541.1	1.8e-158	probable serine/threonine-protein kinase PBL9 isoform X2
Swissprot	Q65XV8.1	1.7e-142	Receptor-like cytoplasmic kinase 176
trEMBL	A0A5P1FEY8	1.3e-158	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G07570.1	62.56	3e-149	525	APK1;APK1A	Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G01165	AT1G07570.1	414	112	4	1	378	1	407	62.56	3e-149	525
AfisC6G01165	AT1G07570.2	414	112	4	1	378	1	407	62.56	3e-149	525
AfisC6G01165	AT2G28930.2	365	98	3	1	356	1	359	69.04	5e-147	517

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	78	345	172.7	8.4e-51

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0016021	C	integral component of membrane
GO:0042742	P	defense response to bacterium
GO:0050832	P	defense response to fungus
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0005730	C	nucleolus
GO:0007166	P	cell surface receptor signaling pathway
GO:0009506	C	plasmodesma
GO:0009507	C	chloroplast
GO:0046777	P	protein autophosphorylation
GO:0052033	P	pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13430	PBS1; serine/threonine-protein kinase PBS1	EC:2.7.11.1	Plant-pathogen interaction	ko04626

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network