Detail information of AfisC6G01188


Location
GeneChrStartEndStrand
AfisC6G01188chr6179931925179934872+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020241496.14.7e-47transcription factor ILR3-like
SwissprotQ9FH37.15.2e-19bHLH transcription factor bHLH105
trEMBLA0A4S8ICP26.4e-38BHLH domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G54680.144.552e-40 162bHLH105;ILR3basic helix-loop-helix (bHLH) DNA-binding superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag248764.t1
Allium fistulosumAfisC6G01188
Allium sativumAsa8G05208.1
Arabidopsis thaliana
Oryza sativaLOC_Os05g38140.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00010.23HLHDomain7512230.42.6e-07

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003677FDNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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