result

Gene information

Detail information of AfisC6G01427

Location

Gene	Chr	Start	End	Strand
AfisC6G01427	chr6	228891019	228894791	+

Sequences

CDS

>AfisC6G01427
ATGGGGAACACATGCCTTGGCCCAAGCCGCATTTGTAAATCCAAATTGTTCGATTCCCTCACGATATTCCATTCCAAACCAAAATCCGAAGCAAACAAAATCATAAATCAACCCTCTCCGGATCCGCCAGCCCCAACCGTCTCCCCCAAACCCGTTACCATCCCCTCATCCGAACCTGAACCTGTTAAGCTACCTGAACCCGCACCAATAAAAAACCCGGATCAGCATAAGCCTCCAAAGGACTCAAACCGTAACAAGGAATCCGATCCACCTCAAACCAAGCCGCCTAAAAAGCCGCACCATGTCAGAAGAGCATCAAACTCCGCAGGCTTACAGATAGAGTCAGTTTTGCGCAGAAAGACAGAAAATGTAAAAGATCTATACAGCATAGGCAGAAAATTAGGGCAAGGCCAATTTGGTACCACATACTACTGTATTGAGAAATCAACCAACAAAGGGTATGCTTGCAAATCGATTTTGAAAAGAAAGCTGGTAACCGATGAAGACGTAGAAGACGTAAGAAGAGAGATACAGATTATGCATCATCTATCGGGGCATCCAAATGTGATTACGATTCATGGGGCCTATGAGGATGCTACAGCTGTACATGTGGTAATGGAGTTGTGTGCTGGAGGGGAGTTGTTTGATAGGATAATACAGAAAGGGCATTACACGGAGAAGAAGGCAGCTGAGCTTGCGAGGGTGATTGTGGAGGTGGTAGAGGTTTGTCATTCTTTAGGGGTGATGCATAGAGATTTGAAGCCAGAAAATTTTCTTTTTGTTGATCAGGAGGAGGAGTCACCACTTAAGACCATTGATTTTGGATTGTCCATTTTCTTCAAACCTGGAGAAAAATTCACAGACGTTGTGGGTAGTCCATACTACGTCGCCCCAGAAGTTCTAAGAAAACATTATGGTTTAGAAGCAGATGTTTGGAGTGCTGGTGTAATAATCTACATACTTCTGAGTGGGGTTCCCCCCTTTTGGGGAGAAACCGAACAAGGAATATTTGAGCAGGTTTTACATGGAGAACTCGACTTTGAAACAGAACCATGGCCAAGCATCTCTGATAGCGCTAAAGATTTAGTAAGCAAAATGCTCGTTAGAGATCCTAGTAAGAGGCTGTCAGCTCATGAAGTTCTTTGTCATCCTTGGCTTCAAGTTAAAGGTGGCATGGCATCCGATAAACCACTTGATTCTGCTGTTTTATCACGACTGAAGCAGTTTTCTGCAATGAACAAACTTAAGAAGATGGCTCTTAGAGTAATTGCCGAGAGCTTATCGGAAGAAGAAATTGCAGGTCTTAAAGAAATGTTCAAAATGATAGACACAGACAACAGTGGGCAGATCACATACGAAGAACTCAAGGCTGGGTTAGAAAGAGTTGGTGCTAATCTCAAAGAATCCGAAATATATGCGTTAATGCAAGCTGCTGATGTTGATAACAGTGGTACTATAGACTATGGAGAGTTCATAGCAGCCACTCTGCATTTGAACAAAGTAGAAAGAGAAGACCATTTATTTGCAGCATTTTCATATTTTGACAGAGATGGTAGTGGCTATATTACTGCAGACGAACTGCAACAAGCATGCGATGAATTTGGTGTAGAGGATGTGAGAATAGAAGATATGATACGAGAAGTTGATAAAGACAGCGATGGGAAGATCGATTACAATGAGTTTGTCGAGATGATGCAACAAGGAAATGCAGGTTTTGGAAGAAAAGGCCTTCAAAATGGTTTTAGGGTGCATTGA

Protein

Gene

>AfisC6G01427
TTCTTCAATACAATCGAAACCCCTGATTAAAATACCCCAAATATATCCCCATTTTTTCGTCCAAGTTTCATCATTTCGAACCCAATATAAAAGATTGGGGCTCATTTCCCCGAGTCTTATGATTTGCCAATGTCGAATATAAATTCAACAAATCTACCATAAATCTCGCATGGGGAACACATGCCTTGGCCCAAGCCGCATTTGTAAATCCAAATTGTTCGATTCCCTCACGATATTCCATTCCAAACCAAAATCCGAAGCAAACAAAATCATAAATCAACCCTCTCCGGATCCGCCAGCCCCAACCGTCTCCCCCAAACCCGTTACCATCCCCTCATCCGAACCTGAACCTGTTAAGCTACCTGAACCCGCACCAATAAAAAACCCGGATCAGCATAAGCCTCCAAAGGACTCAAACCGTAACAAGGAATCCGATCCACCTCAAACCAAGCCGCCTAAAAAGCCGCACCATGTCAGAAGAGCATCAAACTCCGCAGGCTTACAGATAGAGTCAGTTTTGCGCAGAAAGACAGAAAATGTAAAAGATCTATACAGCATAGGCAGAAAATTAGGGCAAGGCCAATTTGGTACCACATACTACTGTATTGAGAAATCAACCAACAAAGGGTATGCTTGCAAATCGATTTTGAAAAGAAAGCTGGTAACCGATGAAGACGTAGAAGACGTAAGAAGAGAGATACAGATTATGCATCATCTATCGGGGCATCCAAATGTGATTACGATTCATGGGGCCTATGAGGATGCTACAGCTGTACATGTGGTAATGGAGTTGTGTGCTGGAGGGGAGTTGTTTGATAGGATAATACAGAAAGGGCATTACACGGAGAAGAAGGCAGCTGAGCTTGCGAGGGTGATTGTGGAGGTGGTAGAGGTTTGTCATTCTTTAGGGGTGATGCATAGAGATTTGAAGCCAGAAAATTTTCTTTTTGTTGATCAGGAGGAGGAGTCACCACTTAAGACCATTGATTTTGGATTGTCCATTTTCTTCAAACCTGGTATGTTATTTCAGAAAAAATAAGTTAAATTCTTGTTAAAGTTTTTCATGTTTTGGTGTCAATGGTATTGGTAATGTAGAGAACTTCAGCTTAGTTTCCTCCTTGCCTTTGTGTCACTTGTGATTTTTTCCTTTGAACAATTTACATTGTTAAGATTTAGATAGAATAAGTAGCAAACATTTAATATTGTCTGTTATATAACAGGTGTGCTATTAATTATGTTTGAACTTTGAAGTGATCTTTATCTTGAATTAAGTAGTCAAGTAAAATTAGCTTTTAGCAGTACTTGTTCAAGCAACAAACATCCTTTAGTGAAATGTTTGTGGGATTGTCTTTATCACTTATGCGATCATATGACCATGTGGAGGACCATTAGAGTGTGATTTAAAGGTTGATCATTTGATTTTCGGACACCAATTACCAATTTTCTAGGAAATAAATTCAGGACCAAGAGGTAAGTGTATAACGACAGGAATGAAATTGGGCACTATGTCATCCTGATACTTGCCTAAATCTAAAGATATAGTATGTATGCATTTGTTATAGTAGGCCATAGTAAAAAGCAATTGATTTATCTGGTATCATGTAAATATCTGATTCGATATTTATGTTCGGGAGGAAAACTAGATTAACTTTTTGTGATTAATGGTTTAGGTTGACTAGCTTTACTTTCCCATCTGTAATTCCCTTGGTATTACCATTACAAAAGACATTCTCCTTCCTTTTTTTCTTTCCATTTCAAGTCTGTTGCTTTCATGAATGGCACTGCTCTATGTCACGCAAACACGCAATAAATATGTATATATGCATGCAAATATCGTGCAATGTAAATACTTGCATTCCCATTTCAGCAAGATATGCATCATGATTCATATGGAATATTTGTATATGTCTGATCACATATTGACAGCTATATCATTTCAGGAGAAAAATTCACAGACGTTGTGGGTAGTCCATACTACGTCGCCCCAGAAGTTCTAAGAAAACATTATGGTTTAGAAGCAGATGTTTGGAGTGCTGGTGTAATAATCTACATACTTCTGAGTGGGGTTCCCCCCTTTTGGGGAGGTCTGTATTTTAATTTTTTATACCAACTGTCTTTTTCTTTCATACAATCAATTTTAACTGAAACAAAACTGTGCTATATTGACAGAAACCGAACAAGGAATATTTGAGCAGGTTTTACATGGAGAACTCGACTTTGAAACAGAACCATGGCCAAGCATCTCTGATAGCGCTAAAGATTTAGTAAGCAAAATGCTCGTTAGAGATCCTAGTAAGAGGCTGTCAGCTCATGAAGTTCTTTGTATGTACTTTTGATTTAATTTATTTTTACGAATATACTACTTCATATAAATTTTTGTAGTTATTTACTGATTCTTACTTCTTTGTATGTACAGGTCATCCTTGGCTTCAAGTTAAAGGTGGCATGGCATCCGATAAACCACTTGATTCTGCTGTTTTATCACGACTGAAGCAGTTTTCTGCAATGAACAAACTTAAGAAGATGGCTCTTAGAGTAAGTTTTTGAAACATATGGGTTTGCTTTGTAAATTCAATTTTTTTTTTGTGTAGAAACTAGAAATAGTGCCTGAATTCCAGGTATTGTGGCAATGCAAAAATAGTATTTCTTGCTAACTCTCAACCAGATTTGTGTAGTGAAATTGGAAACTATATTTACTAGTTTTAAAGCATGAAAAGGAAATGGTTGTCATGATTTTGTTTGTGTAAATATCTGAACTGAAACCAACTATGTAACAGGTAATTGCCGAGAGCTTATCGGAAGAAGAAATTGCAGGTCTTAAAGAAATGTTCAAAATGATAGACACAGACAACAGTGGGCAGATCACATACGAAGAACTCAAGGCTGGGTTAGAAAGAGTTGGTGCTAATCTCAAAGAATCCGAAATATATGCGTTAATGCAAGCTGTAAGTCATTGCATTTCTTATTTTTATTACCAATATAATACAAATACCATGATCCATGTCAACACCTTATCACTGTTTATTTGATAAATACAGATTTTCCGAACATAAATAAACTTAGGAAAACATTGGTTTAGAACACATGCTTATGTAGTTATGTATATGTTGTATGTGCAGGCTGATGTTGATAACAGTGGTACTATAGACTATGGAGAGTTCATAGCAGCCACTCTGCATTTGAACAAAGTAGAAAGAGAAGACCATTTATTTGCAGCATTTTCATATTTTGACAGAGATGGTAGTGGCTATATTACTGCAGACGAACTGCAACAAGCATGCGATGAATTTGGTGTAGAGGATGTGAGAATAGAAGATATGATACGAGAAGTTGATAAAGACAGCGTAAGTTATTTACGTTGTCAAAACTGCTTTCAACTCGTTTTCATAATCAGTCTGTAATTTAACTTTTCGGTCCTTATTTTTCAGGATGGGAAGATCGATTACAATGAGTTTGTCGAGATGATGCAACAAGGAAATGCAGGTTTTGGAAGAAAAGGCCTTCAAAATGGTTTTAGGGTGCATTGAAAATGTAATGAAAATTCTTTTCTTTATCTTATATCATCAAGGGCCTAGCAAGAATTTTATATTTCTCAGCCTCTCGAATGCTGTACAGTTCCAGTGTATTTAAAAATTCAAACTCAAGCTGCTACCTGGAACCCCGAATCACACATTTGCCCCTGCTTTTCGTCGTATTTCCTTTGTTTGATTGTGCATTTATATAATATTGTAGGCTGTAAAGTGAAATCGCATTATTTAGAAAATTGAAGTTTA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020266042.1	1.1e-207	calcium-dependent protein kinase 27-like
Swissprot	Q2QQR2.1	2.4e-199	Calcium-dependent protein kinase 27
trEMBL	A0A5P1FXG4	7.9e-208	Calcium-dependent protein kinase 20

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G10660.1	65.74	0.0	840	ATCPK2;CPK2	calmodulin-domain protein kinase cdpk isoform 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
AfisC6G01427	AT3G10660.1	645	156	9	1	583	1	642	65.74	840
AfisC6G01427	AT5G04870.1	612	158	10	1	583	1	606	68.46	828
AfisC6G01427	AT2G38910.1	588	164	7	1	578	1	581	69.22	818

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	128	386	254.1	1.3e-75
PF13499.3	EF-hand_7	Domain	435	495	45.8	5.5e-12
PF13499.3	EF-hand_7	Domain	505	566	45.5	6.8e-12

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005509	F	calcium ion binding
GO:0005739	C	mitochondrion
GO:0005829	C	cytosol
GO:0004683	F	calmodulin-dependent protein kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005778	C	peroxisomal membrane
GO:0035556	P	intracellular signal transduction
GO:0005516	F	calmodulin binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005789	C	endoplasmic reticulum membrane
GO:0009507	C	chloroplast
GO:0009738	P	abscisic acid-activated signaling pathway
GO:0009931	F	calcium-dependent protein serine/threonine kinase activity
GO:0010359	P	regulation of anion channel activity
GO:0018105	P	peptidyl-serine phosphorylation
GO:0046777	P	protein autophosphorylation
GO:1902456	P	regulation of stomatal opening

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13412	CPK; calcium-dependent protein kinase	EC:2.7.11.1	Plant-pathogen interaction	ko04626

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network