result

Gene information

Detail information of AfisC6G01468

Location

Gene	Chr	Start	End	Strand
AfisC6G01468	chr6	236876822	236878754	+

Sequences

CDS

Protein

Gene

>AfisC6G01468
ATGTCTCGATTCGAATTCAAAAGCAAATCTCAAAGCCAAATCAAAATCGGCTCTCGTAAGCAATTCTCAAATTCAGTTGCGGATTCTAGGGGATTCGATGCGTTGAATTTGATTTGGGGATTTCAGTCGCTGGTGGGTTGGTCACGTGTAGTTGGTCTCAGTGAATTAGGAACTCGCGATTTGGAAATCGTTGTTGGTGGAGGCGGTGTAGCGGATCCTCTTTATCTATGCTCCTTGATTTGTTATTGTGATTGTTTCTTTTGCTGTATCTCATTGTTTTGGTTGAAAATAACAGAGTGGAAGTTCTGGAAGAAATGAAATGGCGTTGACTTTAAACGATTAGAATTAGATACTGCTTCTCTAAAATGGAGTTTCTTTTATGGACTTTGCTACAGGGCTGTAGGAAGGGGTCGCAGAAATGTATATAATCCAACGGGTGGGGTGGAATTGCAGGCCTTTTAAGCAAATGTATATTAATCTAATCTAATGGAGCTAGTCAATACTCATTTGTTGTTCCTAATTGTGTAGGAAATTTAAAGATAGCTGACTTTGGTCTTAGTGCATTTGCTGGAGCAGATGGTTTGCTCCATACGACATGTGGGACTCCAGCATATGCAGCACCTGAGGTTGCTGAAAAGAAAGGATATGATGGTGCAAAGGCTGATATATGGTCCTGTGGAGTCATCTTGTATGTCTTACTAGCTGGTTCTCTTCCATTTCAGGTATAGTTGCATGCTTGTTAAAAGAAATAAAAGATCCATTGTGTATTTTTATACTGTTCATCATCTTCTTTCAGTAGGATTGTTTTCGCTATTAGTGGAAACTCTGTTAGCTGTTCGTTCCATATTTATAGCAATGGCATAAACCATTGTGTTGTTTATAAAATGGTACTTAGAAAATTATAAGCATAGCTATTGCATTTTCGTCGATTCATTAGTACCACCTAACTTTCATTAATAAATACAAAATCCTCGTTTATTTTTGTTATTTCCTAAATGTTTTGAAATCCCCCTTTGATTTTGGATAAGAAATGGTTGTATATACTAAAGAAATATCATAATTCTACATAGATAAGCTGGAATTTGAAAAAGTTTTTGTTCACCACCTGAGACATTCTCTTTTCCATAGTCAATTCGAAAAATCTTTGAATAGACACTATAAAGTTTCTTGCCTCTAAACAAAAACCATGTTCATTTCTGTTATCCATGGTGCTTTTTAGCCTATAGTTGTATTAACTTTCTATTGTGATTTGTACAAAATTGTTTATTTTAAACCTTAAGTTGCTGTACTGTTTCAAAATACAGGATGACAATCTTGTGACCATGTACCGAAAAATCCATAAAGGCGACTTCAAATGCCCATCATGGTTCTCTTCTGATGCTCGTCGCCTAGTCACCAGGCTCCTCGACCCAAACCCGAGAACCCGTATTTCCATTGAAAAAATTATCAATTATCCATGGTTCAAAAAATCTCCGATGCCGCCACCACTTCCACCAAAGAAAGAAATCGATGATACCCCTGAAATATTCAACGCATTTCATCTAATTTCCCTTTCACAAGGCTTCAACCTTTCTCCTTTATTCGAAGCCGACTCAAAAGGAGAAGATATAAGGTTTGCAACTAAAGAACCAGCTAGTGGCATAATATTGTACTAGAAGGAGTGGCCGCTTAGGCAGAAGGAAATATTAAGGTGACCAAAAGCTCGAGTGCTGGAGTCAGACTAGAGAGCAATGGGGCAAGGGGTAGAATGGGAAAATTGTCCGTGGTTGCTGATATATTCTCAGTTGCGCCGTCTGTTTTAGTTGTAGAGGTCAGAAAAGAAGGAGGAGATACACTAGAGTTTATGAGTATTTGCAGTAATGTACTAAGGCCAGCGCTGAAGCATATTGTGTGGACTGCTGCTTCTGATAGCAAGCAAACAGCTGCTGCGTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020675333.1	1.3e-81	CBL-interacting protein kinase 6-like
Swissprot	Q6Z9F4.1	1.2e-82	OsCIPK06
trEMBL	A0A835QLF4	4.2e-82	Non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G30960.1	54.96	3e-79	291	ATCIPK6;CIPK6;SIP3;SNRK3.14	SOS3-interacting protein 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G01468	AT4G30960.1	282	74	7	46	274	158	439	54.96	3e-79	291
AfisC6G01468	AT5G45820.1	276	93	6	46	271	146	421	48.19	5e-66	247
AfisC6G01468	AT1G30270.1	296	106	5	46	279	166	460	42.91	3e-62	235

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	46	163	95.1	3.9e-27
PF03822.11	NAF	Domain	182	212	39.4	4.7e-10

Gene Ontology

Accession	Ontology	Name
GO:0000166	F	nucleotide binding
GO:0005515	F	protein binding
GO:0005739	C	mitochondrion
GO:0004672	F	protein kinase activity
GO:0007165	P	signal transduction
GO:0006468	P	protein phosphorylation
GO:0007275	P	multicellular organism development
GO:0009414	P	response to water deprivation
GO:0009737	P	response to abscisic acid
GO:0010540	P	basipetal auxin transport
GO:0018193	P	peptidyl-amino acid modification
GO:0042538	P	hyperosmotic salinity response
GO:0044763	P	single-organism cellular process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network