result

Gene information

Detail information of AfisC6G01536

Location

Gene	Chr	Start	End	Strand
AfisC6G01536	chr6	248423218	248424409	-

Sequences

CDS

Protein

Gene

>AfisC6G01536
ATGTTGTCTCAATCAGCAAAAAGTTACTTGATTGAAGAGATTACGAGAGGAAAAGAGCTCATGAATCATCTTAATACACTTCTTAACCCAGATGCCGATACACCCTGCGATTTATCTAGTAAAATACTTGAATCCCTTTCAACTGCCCTTGACCTTCTTGGTCCAAAAGAAGCAACAAGCCTTGACGTTGTGGCCACTGCTAATCAAAGCATTGCTTCCAACTTTAGTTTGAAGAGGAACAATCAAAGCACAGATAGACCCTCACTTAGGAGAAGGTACATATACAAGTGTTTTGCACAGCTGTGTTTTCTATTTATGGACAATACAATTTTGATGCATCTCCTAAGTGAACAGTATTTCTTATACATGCTATAAACGTATTTTTTTACATAACAAACAGGAAAGTTGGAGATTCAAAGATGATATACATGACATCAGCGCCACATTGTGATGGTTATCAGTGGAGAAAATATGGACAGAAGCCCATTTCTAATTCTTCTCATCCAAGGTAAGCATTTATTATCTTCTAAATTTATTTGTTAAACTTTCAGTTCGATGTAGCATAAGAGAAGGAAGTTGGTGAAGTAGTACCACATATTATATTTAAGGTTTAATTCACACCAAATTTGAATAGTTAATTTGCATGTTTTGTATCCCTAAGTGGAGATTAATGTATAATCTTACAACTGTACTAATGTATGTATAAATTAAATTGTATATTTACAGGACATATTACAGATGCACATATAAAGATGATCAAGGATGTCTGGCAACAAAAAAGATACAACAACAATGTAATGAGATGTACAGCGACTCTCCTATGTTTCAGGTCATTTACGAACATGAACACTCTTGCAATTCAACCATCACAGGTTCAGAAAATGGGTTTTATCATGATCAATCAAGTTTCAGTATATTTGAAGCCAACGGATCTTCCCCCTTAAGTACCATTAATATTAACAAGATTATTGATGCTGATGATCACGATGAACATAGGTTTCCAAAAGTGGATACTGAGAACTTGTTTAATGAATTAAGCTGCGGGCTTAAGGTTGAAAATAACAATATTATGAATTGTGAATCTGTGAAGGAGATGAACAATTTCCCAATGAGTCCTAATTGGAATCCATATTATGAATATGAATTGGAGTATAATCCAGACATGGAGATTTTACAGAGCTCATTCATTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020244498.1	2.3e-22	probable WRKY transcription factor 46
Swissprot	Q93WU7.2	4.2e-08	WRKY DNA-binding protein 58
trEMBL	A0A1R3G704	3.9e-19	DNA-binding WRKY

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G56400.1	28.96	3e-15	79.3	ATWRKY70;WRKY70	WRKY DNA-binding protein 70

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G01536	AT3G56400.1	183	111	4	4	173	5	181	28.96	3e-15	79.3
AfisC6G01536	AT1G80590.1	156	95	3	70	217	43	194	31.41	8e-15	77.8
AfisC6G01536	AT1G66550.1	170	99	6	11	173	10	169	31.76	2e-14	76.6

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03106.12	WRKY	Domain	109	171	78.3	3.6e-22

Gene Ontology

Accession	Ontology	Name
GO:0005516	F	calmodulin binding
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0010200	P	response to chitin
GO:0044212	F	transcription regulatory region DNA binding
GO:0043565	F	sequence-specific DNA binding
GO:0044763	P	single-organism cellular process
GO:0048522	P	positive regulation of cellular process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network