Detail information of AfisC6G01665


Location
GeneChrStartEndStrand
AfisC6G01665chr6271568485271575779-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrRDY11971.12.6e-20Protein transport protein Sec61 subunit alpha, partial
SwissprotP38377.36.2e-19Protein transport protein Sec61 subunit alpha isoform 1
trEMBLA0A6J1J0531.9e-20protein transport protein Sec61 subunit alpha-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G29310.186.897e-26 114SecY protein transport family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00344.17SecYFamily15939.92.7e-10
PF00069.22PkinaseDomain6515440.32.1e-10

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0016049Pcell growth
GO:0005829Ccytosol
GO:0005791Crough endoplasmic reticulum
GO:0006614PSRP-dependent cotranslational protein targeting to membrane
GO:0006620Pposttranslational protein targeting to membrane
GO:0007029Pendoplasmic reticulum organization
GO:0030176Cintegral component of endoplasmic reticulum membrane
GO:0034341Presponse to interferon-gamma
GO:0036498PIRE1-mediated unfolded protein response
GO:0039019Ppronephric nephron development
GO:0043022Fribosome binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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