result

Gene information

Detail information of AfisC6G01760

Location

Gene	Chr	Start	End	Strand
AfisC6G01760	chr6	289645329	289647044	-

Sequences

CDS

>AfisC6G01760
ATGTCAACGCCAAACCCTAAACGCCCAAATCGGCGCCGCATGGATCTCTCCCTCCCTCTCCCAGCCCGCGATTCGTCTCCCTCCGTCCCTCTTCCTCTACCTCTCCCTCCTCCTCCTTCTGCAACGTCATCATCATCAACATCTCCTCTAACTGCCCCCGCAACTCCTTCCTTATCCGACCTCCAGCGCGAACGCCGCCTCGGATCCGGTGCTGGTGGTATCGTCTGGCTAGTTCGCCACCGCCCCACCAACCGTGTATACGCTTTGAAAGTCCTCTATGGCAATCACGATGACGCTGTCCGTCGCCAGATCTGTCGAGAGATCGAGATCCTCCGCACGGCTGAAAACCCCTTCGTCGTCCCCTGCCATGCCATGTTCGATCACGCCGGTGAAATCCAGATCTTGCTCGAATACATGGATGGGGGATCTCTTGAAAATAAGCATATCACCAACGAATTGTTTTTATCTCATGTTGCCAGGCAAGTCCTATCTGGACTTGCTTATCTCCACCGACGTAGAATCGTTCATCGTGATATCAAACCGTCGAATTTGCTGATTAATACGAAACATCAGGTCAAGATCGCCGATTTTGGTGTGGGCCGGATCCTGGCACAAACAATGGATCCATGCAATTCGAGTGTGGGTACTGTTTCGTACATGAGTCCGGAGAGGATCAACACAGATTTGAACGATGGGGTATACGATGGATATGCAGGTGATATATGGAGTTTTGGATTGAGCATGCTGGAGTTTTATTTAGGGAAATTTCCGTATGGTGAGAATTTGAGAGGACAGGGGGATTGGGCTAGTTTGATGTGTGCTATTTGCTTTTCAAATCCACCACAGGCACCTGAAACAGCATCTAATGATTTTAGGAGTTTCATTGCTTGTTGTTTGCAGAAGGAACCAAATCGGAGGCATACTGCACCGCAGCTGTTGCAACATCCATTCATCACTCAGACTCAGCAAACTGTGTTGTCTGGATCGGTTTCAGTTTAG

Protein

Gene

>AfisC6G01760
ATTTTTTCCATGCATGCTAGTTACCTAATAAAACTCAAATCATACATGTTCCTAAGTTCAATAAAGAAGCATTTATTAGCGTGTTTAAATAAATAATTTCAAAATATCCTCAACTTTTTTTTGTAAGTCATATAATTTTCGTAAAGTTTATTTGTAAATTTGCATACAGTAAGAAATTCTGAATATTATCGGGTGGAAAATCTGGCGTCAAAAATTATTTTTCAGATAAATATCTCTCATTCGATCCAAAATAACAGATTTTTCTCTCTATAAATTTCAATCTCTTCTAATTTATCCTCATTCTCAATCATCTCCAAATTACAACTCTTCACCTCAAAAATATTCATCAGAACAATTTAATTCATAAAATAAAATGTCAACGCCAAACCCTAAACGCCCAAATCGGCGCCGCATGGATCTCTCCCTCCCTCTCCCAGCCCGCGATTCGTCTCCCTCCGTCCCTCTTCCTCTACCTCTCCCTCCTCCTCCTTCTGCAACGTCATCATCATCAACATCTCCTCTAACTGCCCCCGCAACTCCTTCCTTATCCGACCTCCAGCGCGAACGCCGCCTCGGATCCGGTGCTGGTGGTATCGTCTGGCTAGTTCGCCACCGCCCCACCAACCGTGTATACGCTTTGAAAGTCCTCTATGGCAATCACGATGACGCTGTCCGTCGCCAGATCTGTCGAGAGATCGAGATCCTCCGCACGGCTGAAAACCCCTTCGTCGTCCCCTGCCATGCCATGTTCGATCACGCCGGTGAAATCCAGATCTTGCTCGAATACATGGATGGGGGATCTCTTGAAAATAAGCATATCACCAACGAATTGTTTTTATCTCATGTTGCCAGGCAAGTCCTATCTGGACTTGCTTATCTCCACCGACGTAGAATCGTTCATCGTGATATCAAACCGTCGAATTTGCTGATTAATACGAAACATCAGGTCAAGATCGCCGATTTTGGTGTGGGCCGGATCCTGGCACAAACAATGGATCCATGCAATTCGAGTGTGGGTACTGTTTCGTACATGAGTCCGGAGAGGATCAACACAGATTTGAACGATGGGGTATACGATGGATATGCAGGTGATATATGGAGTTTTGGATTGAGCATGCTGGAGTTTTATTTAGGGAAATTTCCGTATGGTGAGAATTTGAGAGGACAGGGGGATTGGGCTAGTTTGATGTGTGCTATTTGCTTTTCAAATCCACCACAGGCACCTGAAACAGCATCTAATGATTTTAGGAGTTTCATTGCTTGTTGTTTGCAGAAGGAACCAAATCGGAGGCATACTGCACCGCAGCTGTTGCAACATCCATTCATCACTCAGACTCAGCAAACTGTGTTGTCTGGATCGGTTTCAGTTTAGATTTTTATTGAGGTTGTTTTGATGATTGAATGATGATTAATAGTGATGATGATCAGAATGATGATAGCTGTGAATGATGGAGGGGTTTGTTGACGGTTAAGGTTTGTGTTTACTCTATTTATTCTTGTAATTGTTACATAAGTTGAGTTGTTAAATTGATGTTATGTTTTGTTCTCTTGGTTTCGTGATGATCTGATAAAAAGATGTTAATTTGGAAATGGGATGTGAACTTAATTGAGTTTCATTAATGATGGTTCAATGATAAATGTGAATGTAATAAATGAAGTTAGTTTGTAAATTGTAAAAGATTAATTTTTTTTGAAAAATGTCTTTCAAGATACAAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008808344.1	5.4e-127	mitogen-activated protein kinase kinase 5-like
Swissprot	Q8RXG3.2	2.9e-109	Mitogen-activated protein kinase kinase 5
trEMBL	A0A835R0Y8	1.3e-127	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G51660.1	64.63	2e-116	415	ATMEK4;ATMKK4;MKK4	mitogen-activated protein kinase kinase 4

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G01760	AT1G51660.1	328	103	3	1	318	10	334	64.63	2e-116	415
AfisC6G01760	AT3G21220.1	312	100	2	11	321	19	328	66.99	7e-114	407
AfisC6G01760	AT1G73500.1	317	142	5	10	320	6	308	48.90	5e-80	294

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	62	318	198.5	1.1e-58

Gene Ontology

Accession	Ontology	Name
GO:0000187	P	activation of MAPK activity
GO:0005515	F	protein binding
GO:0001818	P	negative regulation of cytokine production
GO:0002229	P	defense response to oomycetes
GO:0016020	C	membrane
GO:0005739	C	mitochondrion
GO:0004707	F	MAP kinase activity
GO:0004708	F	MAP kinase kinase activity
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0006357	P	regulation of transcription from RNA polymerase II promoter
GO:0007112	P	male meiosis cytokinesis
GO:0043066	P	negative regulation of apoptotic process
GO:0009524	C	phragmoplast
GO:0009570	C	chloroplast stroma
GO:0009611	P	response to wounding
GO:0009620	P	response to fungus
GO:0009626	P	plant-type hypersensitive response
GO:0009651	P	response to salt stress
GO:0009693	P	ethylene biosynthetic process
GO:0009862	P	systemic acquired resistance, salicylic acid mediated signaling pathway
GO:0009864	P	induced systemic resistance, jasmonic acid mediated signaling pathway
GO:0009866	P	induced systemic resistance, ethylene mediated signaling pathway
GO:0009926	P	auxin polar transport
GO:0010120	P	camalexin biosynthetic process
GO:0010150	P	leaf senescence
GO:0010227	P	floral organ abscission
GO:0010229	P	inflorescence development
GO:0010311	P	lateral root formation
GO:0010558	P	negative regulation of macromolecule biosynthetic process
GO:0010629	P	negative regulation of gene expression
GO:0015630	C	microtubule cytoskeleton
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0022603	P	regulation of anatomical structure morphogenesis
GO:0030295	F	protein kinase activator activity
GO:0031327	P	negative regulation of cellular biosynthetic process
GO:0044092	P	negative regulation of molecular function
GO:0044430	C	cytoskeletal part
GO:0046777	P	protein autophosphorylation
GO:0048513	P	animal organ development
GO:0048585	P	negative regulation of response to stimulus
GO:0050673	P	epithelial cell proliferation
GO:0051128	P	regulation of cellular component organization
GO:0051248	P	negative regulation of protein metabolic process
GO:0072359	P	circulatory system development
GO:2000037	P	regulation of stomatal complex patterning
GO:2000038	P	regulation of stomatal complex development
GO:2000145	P	regulation of cell motility

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13413	MKK4_5; mitogen-activated protein kinase kinase 4/5	EC:2.7.12.2	MAPK signaling pathway - plant	ko04016
			Plant hormone signal transduction	ko04075
			Plant-pathogen interaction	ko04626
K20604	MKK9; mitogen-activated protein kinase kinase 9	EC:2.7.12.2	MAPK signaling pathway - plant	ko04016

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network