result

Gene information

Detail information of AfisC6G01911

Location

Gene	Chr	Start	End	Strand
AfisC6G01911	chr6	317380482	317388032	-

Sequences

CDS

Protein

>AfisC6G01911
MVDHNMNRGSLNSSFLVLNVGTNTLEVGNSNVHENSIEFTHQIQISTTTDKKKATADTFESNDESSSKSNSLKRMHDEEEDPEWVPDKRASKSNCSSNDYFKLKAKEAINSNPQVNRGDSWLIYKSLPGPPSSYLIKLLEYFGWKVNFQGDEYRYVSPNGDPYYSNQKAYETFLDITSKYSQKRGILSGHLQTSFYLDTTSGYFGVGMGNIASNIKKKKRSQRKKITNFENIFKLNNCTDPIKTIAKKPVQVLNRGEKCHDVERELSIGFNQQVFNLGRCKENNIDQNALNGAHGIVKYMDDEATNLVCQKRRSNNKGIKLPCLRRSVRLNKKTNISYREEDLTKQEEHRSFANIESGPKKTVGKKSTEILHGNDRRMGFKGSSSLRNLNAKRMHSRIRRSTRANEKRVHVNDNSDADPVCEENVSDFETDVEDNPHKEKKPTETLPFPNLNGPLKRIIPEILISENNTIINRKMKEKKRGGCGLSIRRNRKDEHQDEIISYGKLNIITLLIELGTLAENDRIHFVLKNSNTKTTGLVTKDGIKCFCCKESMSVSKFVAHANGSLENIFLSSRKTFLSCMKEVWEKEKIQRKVGFKNVGLGDPDPSDDTCAICADGGHLICCDSCPATFHQSCLMLETLPDGSWYCPYCVCKICRAHGSDNMLSCKECGYKCHKDSCLENDMHLMGSVPFSFCGKGCKNVSAELPSILGKKNQTGDGFSWSLLKCLDEEAGNISSERLSSIMESNIKLSLALCVLDECFDSLIDRRTGVDILCQAVYNCGSNFKRLNYEGFYTLILERDDDIISVASLRLHGTSLAEMPFIGTRFMHRKQGMCRRLIKGIEDMLRELRVEKLVIPAIPDMMETWTKSFSFEPLKSSHKEEIMNMSLMVFTGITLLQKPIYISTSVPKVVQTDNSAKCLNNNTQQKKEVPSFLNGQGSSAHHFKSPTGPQMNINTQSGLGNNFTAILEQPKPSTSSHFVNKGFSLGSSSNVFGTDSRNLVKNGEKIHTSLEIQNRQNSIQESQNVPNLYCNENILDDEWGIYVSYLKGNIDSMKPPNGITCNGTVMKSADKGKAHVSSTKASSKSCDGFVPETSKADAANIATCSNADVNGQSRSSDDVMDLEVLAMISLDNLLRSE

Gene

>AfisC6G01911
ATGGTGGATCACAATATGAACAGAGGATCCCTCAACAGCTCGTTTTTAGTGCTTAACGTTGGAACTAACACTCTTGAAGTGGGTAACTCCAATGTGCATGAAAATTCAATAGAATTTACGCATCAAATCCAAATAAGTACTACTACGGACAAAAAGAAAGCTACAGCTGATACTTTTGAGTCAAATGATGAAAGTTCTTCGAAATCAAACAGTTTGAAAAGAATGCATGATGAAGAAGAAGATCCTGAGTGGGTGCCTGACAAAAGGGCGAGTAAGAGCAATTGTTCTTCCAATGATTATTTCAAATTGAAAGCAAAAGAAGCTATAAATTCAAACCCTCAAGTAAACAGAGGAGATAGTTGGTTAATCTATAAATCACTCCCAGGCCCACCATCTTCTTATTTGATAAAACTCTTAGAATACTTTGGTTGGAAGGTGAATTTTCAAGGAGATGAATACAGATACGTATCTCCTAACGGGGATCCCTATTATTCAAATCAAAAAGCTTATGAAACATTCTTGGATATTACATCTAAATATAGCCAGAAAAGGGGCATTTTGTCTGGGCATTTACAAACTAGTTTTTATCTTGATACCACTAGTGGTTATTTTGGTGTGGGAATGGGTAATATTGCTTCAAACATTAAAAAGAAAAAGAGAAGTCAACGAAAGAAAATTACCAATTTTGAAAATATATTCAAGCTTAATAACTGTACCGATCCTATAAAAACCATTGCCAAGAAACCTGTGCAAGTGTTAAACAGGGGGGAAAAATGCCATGACGTTGAAAGAGAGTTGAGCATTGGATTTAATCAGCAAGTTTTTAACTTGGGCAGATGCAAGGAAAATAACATAGATCAAAATGCTTTGAATGGTGCTCATGGTATTGTTAAATATATGGATGATGAAGCAACAAATTTAGTTTGTCAAAAGAGGAGGTCGAATAACAAAGGAATAAAATTGCCTTGCTTAAGGAGATCTGTTCGTCTTAACAAGAAAACTAATATTTCATATAGAGAAGAAGATTTAACAAAACAGGAAGAACATCGTTCATTTGCTAACATTGAATCTGGCCCTAAAAAAACTGTTGGTAAGAAAAGTACTGAAATTTTGCATGGTAACGACCGAAGGATGGGTTTTAAGGGCTCATCATCTTTAAGAAATTTGAATGCAAAGAGGATGCATTCTCGTATTAGGAGATCGACCCGTGCTAATGAGAAGAGAGTTCATGTGAATGATAATTCAGATGCAGATCCTGTGTGTGAAGAAAACGTCTCAGATTTTGAAACTGATGTGGAGGACAATCCTCACAAGGAAAAGAAACCAACTGAAACTCTTCCTTTCCCAAATTTAAATGGACCATTAAAGAGAATAATTCCAGAAATCCTTATATCTGAAAATAATACTATCATCAATAGAAAAATGAAGGAAAAGAAGAGAGGTGGCTGTGGGCTATCAATAAGGAGAAACAGAAAGGATGAACATCAAGATGAAATTATATCATATGGAAAGCTGAATATTATAACCCTGTTAATTGAACTTGGCACTTTAGCTGAAAATGATAGGATTCACTTTGTATTAAAAAACAGCAACACAAAAACCACAGGATTAGTAACTAAAGATGGCATTAAGTGTTTTTGCTGTAAAGAATCAATGTCAGTATCCAAATTTGTAGCTCATGCTAATGGTAGTCTTGAGAACATTTTCTTATCGTCAAGGAAAACATTTTTGTCGTGTATGAAAGAAGTTTGGGAGAAGGAAAAGATTCAAAGAAAAGTTGGGTTTAAGAATGTTGGACTTGGTGATCCAGATCCTAGCGATGACACTTGTGCGATATGTGCTGATGGAGGTCACTTAATATGCTGTGACAGTTGTCCAGCCACATTTCATCAGAGCTGCTTGATGCTTGAGGTAGTATTTATTTTGTTTAACATTGTATATTTTTATACGACTATCATACTTATTCTTTCCATTATTTCCATTGAGCTAAATTTCTCTCTGCGTGTGTTAAAAGCCGTACATCTATGGCAAAAGCTTCCTCTAACAGATAATTGTCTTTTCTTCCTCTGTACTTTCTTTTGACTTCATACTTTTGATGATAGGTTGGGACCGTTGGGGATATTTATGTCATGTAACTTGTGCATAATTTTCGGTCTATTTAAATTTTCCTTCAAACTTCTTGCTGACATCTTCTTGCTTTTCCACCTTATTTTGTAGTGCTTAAATTTGTTTAGTTGTTTACTTGTTTTGCTTATAGAAGTCTTCAAAGCCTATAATTTGATTAGATATGCCTGATATTTCTATGTTCTTTTTGATAATCTAGGAATCTAACTTATTGCAAGTACTTAACGGTCTTAATCGTTAACTGAGAAAACGTAATGTTTTATCATGTTATTCTATAGTGTAATCATAGTTTTATGTTAACCAAAAAAGTTGCAGTCTATCTCATCTATGATGTCTTATGTCATGCGTAATTCTTCATTGTAACCTATTCCCTACAAACATTCACTAATAAAGTGCTCTATCGCAGACTTTACCTGATGGTAGCTGGTATTGTCCCTATTGTGTATGCAAAATATGCAGGGCTCATGGTTCGGACAACATGCTGTCTTGCAAGGAATGTGGATACAAATGTAAGCTCCGATGACTTGCATTTCATCTATTATGCGAATGTTTATTTACACAATCTGTACTGTTTATAAGATTTGTATGTGATCTCTCTATTTGAATCTGCTACAGGTCATAAGGATAGCTGCTTGGAAAATGACATGCACTTGATGGGTTCAGTACCCTTTTCATTTTGCGGAAAGGGTTGCAAAAACGTAAGGTTTTTTACAATTGATATTCAAATGTCAAACTCATAATCTTTCCTTAAAGTAAATCACTGAAATAAGTTTGAAATAAGGTAAAGATCTTTTTCGTCATCAAATCATATGGAATATGCATTTTGTGTTTTGTTTATTTATGTTTGTTATTTTGAGTTCTATCGCTATAGAGATTTATAAAAGCTAAATAGTTGACAATCTGAAAGTCTAAAATTGTTTGCCTCATGGCCGAACTGTAGGCTTTTGTTAAATGTGGGTTTGATTTCAGTTAATAAGCAGTACAGCTTTGCAGAAGTATACGTTATGACTTGTTAAGCATTAACCACTTACCAGAGTAGCTGAATAGTTGAAGGCTTGAAGTACTTATGTTTAAGTTATATAGTATAGAGTATGTACACATCCCTAGTTCATTGGCGATGGTTATGGTTAACATTTTGAGTCTAATAGATAATATCATTTTGATTGTCGAATGTTCTAATTTTTTTACAGTTAACATCTTCCAAAGCATCATGCTAGATATTGCTCATGTATAATTTTTAGTCGTGTAAGTTGTCAAGTTCAATATTTCTTATCATAAAGAAATGTAAACATATTTTAGCAGCGCTATGAGTCTAAATCTTATTGGCTAATGTGTATCAAAACTAATGCTTATTTGTTGAAATTCCAGGTTTCTGCTGAATTACCAAGTATCCTTGGTAAAAAGAATCAAACTGGGGATGGTTTTTCGTGGAGTCTTTTGAAGTGTCTTGACGAAGAAGCAGGAAATATTTCAAGTGAAAGGCTTTCTTCTATAATGGAATCAAACATAAAACTCTCTTTAGCATTATGTGTATTGGATGAATGTTTTGATAGTTTAATAGATCGAAGGACTGGAGTTGACATTTTATGTCAAGCGGTTTACAATTGTGGGTATGCTCCTCTCTGTCTCTCTTATCACAATTACAAAACTATGAATTTGTATCATCAACTTCTACTCTCAGATATTTACATGCAAAACTCTGTCACTGTGCAAATGCCTTTTACTGTATCGCATACAATATTGTTAATTCATAGCATATAAGCCTTCCTTAGATTCTAATAAAATTTGTTATTTAGTTGTGTAATAAATCAGCTTTTGCTGAAGAAATTAGTCTTTGGATTTATATAAACATGTCATTCACTTTTATTAGGTATTTATGGGAGACATCCTATGTTTATATTACTGCAGTTTGCATATTGGTTGCACTTAATGAAGACCTGGTTTTTTTTTTCTTTACTCATATAGATCCAATTTTAAGCGATTGAATTATGAAGGATTCTACACTTTGATTTTGGAGAGAGATGATGACATTATATCAGTTGCATCATTAAGGTTTGACTTCTTAAATCTTTAAATCTCTTGGCATTTGTTCAATCCTATCTAATGTTTTCGCCGTGTTTTGTAGTACTTTTTTGTTGGCTTAAATGTAGCAATAATAATTGATATCTATGGCTAAAATTACTTCATCTAAAAGAATTCATTGAAGGATATATCCTATTCAAAAGCGCATGTGAGGATAAGTTATGTGTTATGATAACACTTCTTAGTTATATGTAGATTAAGATCTAAGAGTTTGCACTGTCGCAACCATTTAACTCTAAATTATCCTCAATGAATAACTTAAGTATCTCGTAGATGAATGATAAACATGGATAGGTTGAGTTACACAATCGGTGCTTGTATTATTTTGTTCTTTGAAAACTATTTTAAACCACCATAATTATGTTTGAAAAGACGTTTCTGTGATACTTGTTGCTAATTCATGTTGTGTCATCCACCATATTTAATTGTAACTTCTTGAGAATCGTGGGGCTGTGGAAAAAAAAAGTGGCTTTTACGGATTTTTTTTTCCTGGAAATTTACTTTACATTCATTCTATAGTGCAATATCACTAATTATATTTATATCTTCAGTCATGTCTATAATATCCTTTTCAGTAGCTAATGCAGCTAATTTATTCATTCTAGTAGATCAATAAAATAGGAGAAGTAATCAGGTAAATGGGGGGTTCTAAAAAAAGAAAACAAGGCTTTTACAGATCATTTTTTTCCTGTAAAATCAATCTGTGTTCATTCTCTAGTGCAAAATGATTAATGTATTTTTTTCATCAATCATGTCTAAATATCTTTTCGACAGCTAATGTGGTTAATATATTCAATCTAACAAAGTAATAGAATAGGAAAATCAATTAAGTAGATAGATATTGTCAGTTTAAGACATACATAGCTAATCAAAAATACCATTATAATTATTATTTGTAACTATCATATAAACCAGATTTCATAAACACAATCCTTTTAACTTGTGCTATTTTTCAATCCAAAGTATACTATGAAATATAACTCAAATATACAACTGAAAACCATCAACATCAAAAGCCAATAAGCCATAGACGGTCGTACGACTTTGTGCTATCTCAAATTATACATATATTTATGTTTTTGCTTTTTTACAAGTAATATAGAATAAAATTAACCGAATATCAAGTGCAAATTAGTTGAATCCGAACCAAACAGCAGTTCGCAATAAATTAAAATACACATCTGTGCGTGCGTGCGAAATTACACATGTAGATATGATACTCTTCATTGTATGCAAACGCTGATTATATCTGAATTAGCATATAGGAAGAGAAATATGTAGTTTAGCTTTTGACTTTCAATCCCAGGTATTTATTTGTTACGGCAGTCACCTGAATTATTATTGTTTTGGCAAAGTGAAATGACGCTATGCTCATTGAATTGAAACAGTGGTAGTTAATGTATTTCTATCCTTTCAATCAGCTAAGGCCTTGGAAAAGGTAAAAGGCTTTGAGTTTCATTCCCAAAAGTAAAGGGCTATGAAAAATATAGATTTGACTTGGTACAAATTTTTCCATCCAGTTTTAGCATAATTGTCCTGTACAACAATTAAAATGGAGCCCCGCCCAACCATCCATTGACGGTTAAGCTTTACGTACATGGAATAAACCCGACCTTTTGTTGTATCAAAGAACCATTTATCATGGCAAAAATTAACCTAGAATATACAAATATGAATCATTTGCTCTCATACTTTATTTTATTTTAATAAAAAGCCGCCTAATGTCGTACGCAATGTCGATGTTCATAATTTCTTTTAATTGCATTTAGGCTACATGGAACATCCTTGGCAGAAATGCCATTTATTGGCACCAGATTTATGCATCGAAAGCAAGGCATGTGTCGTCGCCTCATCAAGGGAATTGAAGATGTAAGTCAAAATTTTCACAGGTTCAACCGCTTTATTTTTCTCCCTCCCTCCCTCAGTACATACATACATACACATACATGCAACATAGGTATATGTATGTATGTATGTTTATGTACGTATTTATGTATGTACGTACGTATGTTTTTTACAACTCAATCTCCTGGAGTTTACATTGATAATTAGCAATGTCTAAGCTTTTTGTAAGTGTGTACAAGTAGATGTGATACAAAAACAGCGGTTTTAGTGAAGTCTCGACTCTCTTTGGCATGCATACTCCAAATTCAGTTCTCCTAATGTTTCTAACTAACACACAAGGGAATTCGGTTATGTGATAATATATCATGAATTTATGCGTGACAGATGTTACGTGAACTACGTGTGGAAAAACTTGTAATTCCTGCTATACCAGATATGATGGAAACATGGACAAAATCTTTTTCATTTGAGCCCCTGAAGTCATCTCACAAGGAGGAAATCATGAATATGAGCTTAATGGTATTCACAGGGATAACCCTTCTGCAAAAACCTATTTACATTTCAACTTCAGTGCCGAAAGGTAGTACTTTATTTCTCTATGTTCTGCACTTCTCATCATCACTTCAATCATTTATACATTTCACTGTAAAAAATAATAATTGTGCAGTTGTGCAAACAGATAATAGTGCCAAGTGCCTGAATAATAATACACAGCAAAAAAAAGAAGTACCAAGTTTTCTTAATGGTCAAGGAAGTAGTGCACACCACTTTAAATCTCCTACCGGCCCTCAGATGAATATCAATACCCAAAGCGGACTTGGAAACAATTTTACTGCAATACTCGAACAACCTAAACCAAGTACCAGTAGCCATTTCGTGAACAAGGGATTTAGTCTCGGTAGCTCGAGCAACGTTTTTGGAACAGATTCAAGAAACCTTGTTAAAAATGGAGAGAAGATACATACTAGTCTTGAAATACAGAATCGCCAGAATAGCATTCAAGAAAGTCAAAACGTGCCAAACTTGTACTGCAATGAGAATATTTTGGATGATGAATGGGGGATTTACGTAAGTTATTTAAAAGGAAATATTGATAGTATGAAGCCTCCTAATGGCATTACTTGTAATGGTACGGTTATGAAAAGTGCTGATAAGGGTAAGGCTCATGTTTCATCTACAAAGGCATCCTCCAAAAGCTGCGATGGATTTGTACCTGAAACTTCAAAAGCTGATGCTGCAAATATTGCAACTTGTTCAAATGCTGATGTGAATGGTCAGTCTCGGTCCTCTGATGATGTGATGGATTTGGAGGTGCTTGCAATGATATCACTGGACAACCTTCTTAGAAGTGAGTAGCTGAAACTCTTTTGCCTTGAATTCTGGGATTTATGGTCGGTTTTGAATTCTGGAATTTTGTTGATTTGAATTTTGTCGTTGCATTTTGTTGAACTTTTAAACTTCGTATTTTTGTTTTATTATTTTCAGTAAGCCTTATGTATT

Functional annotation

Database	accession number	e-value	annotation
nr	ONK57499.1	9.7e-152	uncharacterized protein A4U43_C09F1130
Swissprot	F4IXE7.1	1.7e-100	Repressor of silencing 4
trEMBL	A0A5P1E4U9	7.0e-152	PHD-type domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G14980.1	40.92	6e-105	379	IDM1;ROS4	Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G01911	AT3G14980.1	479	267	7	473	937	584	1060	40.92	6e-105	379
AfisC6G01911	AT1G05380.2	443	232	9	476	899	486	925	42.66	2e-102	371
AfisC6G01911	AT1G05380.1	443	232	9	476	899	486	925	42.66	2e-102	371

Ortholog group

Species	Genes
Allium cepa	g120340.t1; g345437.t1
Allium fistulosum	AfisC6G01911
Allium sativum	Asa8G04680.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF16135.2	Jas	Family	506	564	44.2	1.4e-11

Gene Ontology

Accession	Ontology	Name
GO:0000122	P	negative regulation of transcription from RNA polymerase II promoter
GO:0000978	F	RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000980	F	RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0001103	F	RNA polymerase II repressing transcription factor binding
GO:0001228	F	transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
GO:0002039	F	p53 binding
GO:0002458	P	peripheral T cell tolerance induction
GO:0003713	F	transcription coactivator activity
GO:0006333	P	chromatin assembly or disassembly
GO:0016020	C	membrane
GO:0004402	F	histone acetyltransferase activity
GO:0005829	C	cytosol
GO:0004713	F	protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0016567	P	protein ubiquitination
GO:0005719	C	nuclear euchromatin
GO:0005726	C	perichromatin fibrils
GO:0005730	C	nucleolus
GO:0005813	C	centrosome
GO:0006959	P	humoral immune response
GO:0008026	F	ATP-dependent helicase activity
GO:0008270	F	zinc ion binding
GO:0008285	P	negative regulation of cell proliferation
GO:0042802	F	identical protein binding
GO:0009506	C	plasmodesma
GO:0010385	F	double-stranded methylated DNA binding
GO:0042981	P	regulation of apoptotic process
GO:0016581	C	NuRD complex
GO:0016604	C	nuclear body
GO:0016922	F	ligand-dependent nuclear receptor binding
GO:0017015	P	regulation of transforming growth factor beta receptor signaling pathway
GO:0030163	P	protein catabolic process
GO:0030218	P	erythrocyte differentiation
GO:0030514	P	negative regulation of BMP signaling pathway
GO:0031492	F	nucleosomal DNA binding
GO:0031647	P	regulation of protein stability
GO:0032602	P	chemokine production
GO:0032993	C	protein-DNA complex
GO:0033333	P	fin development
GO:0034056	F	estrogen response element binding
GO:0034243	P	regulation of transcription elongation from RNA polymerase II promoter
GO:0035064	F	methylated histone binding
GO:0035166	P	post-embryonic hemopoiesis
GO:0043044	P	ATP-dependent chromatin remodeling
GO:0043971	P	histone H3-K18 acetylation
GO:0043972	P	histone H3-K23 acetylation
GO:0044030	P	regulation of DNA methylation
GO:0044154	P	histone H3-K14 acetylation
GO:0045060	P	negative thymic T cell selection
GO:0045944	P	positive regulation of transcription from RNA polymerase II promoter
GO:0046777	P	protein autophosphorylation
GO:0048066	P	developmental pigmentation
GO:0055074	P	calcium ion homeostasis
GO:0060215	P	primitive hemopoiesis
GO:0061630	F	ubiquitin protein ligase activity
GO:0070410	F	co-SMAD binding
GO:0070412	F	R-SMAD binding
GO:0070562	P	regulation of vitamin D receptor signaling pathway
GO:0070577	F	lysine-acetylated histone binding
GO:0070735	F	protein-glycine ligase activity
GO:0070739	F	protein-glutamic acid ligase activity
GO:0071391	P	cellular response to estrogen stimulus
GO:0080188	P	RNA-directed DNA methylation
GO:0097536	P	thymus epithelium morphogenesis
GO:1901796	P	regulation of signal transduction by p53 class mediator
GO:2000410	P	regulation of thymocyte migration

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network