Detail information of AfisC6G01975


Location
GeneChrStartEndStrand
AfisC6G01975chr6327915174327924772+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010912431.19.7e-177tubby-like F-box protein 14
SwissprotQ75HX5.13.5e-163Tubby-like F-box protein 1
trEMBLA0A8K0MXD85.3e-177Tubby-like F-box protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G76900.163.422e-160 562AtTLP1;TLP1tubby like protein 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
--

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00646.30F-boxDomain5210537.71.1e-09
PF01167.15TubDomain117427316.39.2e-95

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0005515Fprotein binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005576Cextracellular region
GO:0005829Ccytosol
GO:0005634Cnucleus
GO:0005929Ccilium
GO:0006355Pregulation of transcription, DNA-templated
GO:0008081Fphosphoric diester hydrolase activity
GO:0009536Cplastid
GO:0009555Ppollen development
GO:0009620Presponse to fungus
GO:0009651Presponse to salt stress
GO:0009682Pinduced systemic resistance
GO:0009723Presponse to ethylene
GO:0044212Ftranscription regulatory region DNA binding
GO:0035091Fphosphatidylinositol binding
GO:0042542Presponse to hydrogen peroxide
GO:0061512Pprotein localization to cilium
GO:0071470Pcellular response to osmotic stress

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K19600TULP1; tubby-related protein 1EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.