result

Gene information

Detail information of AfisC6G02022

Location

Gene	Chr	Start	End	Strand
AfisC6G02022	chr6	334043316	334045102	-

Sequences

CDS

>AfisC6G02022
ATGAACGGTGTCTTCCAAGCGCTAATCGCCGCTACAGTCAGCTTCCTACTAATCACATTCATCTTCCTGTTCTTCACCCTCCTCTGCCGCCGGCGCCCGCGGCCTAAACCCGCAACCCAATCCCCACCAAACCGTCCACGCGTCCCATCCACCTTCTCCTCCTTCTCGCCCTCCCTCCCCCGCATCTCCCTCTCCACTGTCGCCGCCGCCACCTCCAACTTCTCCCCTTCCCTCATCCTCGGCGACGGCGCCTTCGGTTACGTCTACAAAGCCACCCTCCCCACCAACCTCACCGTCGCCGTCAAAAAGCTCGAACCCACCTTCGCCTTCAACCACGACGGCGACCGCGAGTTTCGCGCCGAACTCGAAACCCTAGCAAAGATCCGCCACCCGAACCTCATCAAACTCCTCGGATTCTGCTCCTCCGGCCCAGATCGCGTCATCATCTACGAGTTTATTCAAAACGGTAGCCTGGATTCCTGGATCCACGAATCGGATCCAAATCCAAGCCAGCTAACTTGGGGAACCCGGTTCCAGATAATTCTAGGAGTAGCCAGAGGTTTGTCTTTCCTTCACAATGAGTGCACGCCATGTGTTATACACAGGGACATAAAGTCAAGCAACGTGTTATTGGATGCGGGTTTTGAACCCAAGATAGCAGATTTCGGGCTTGCGAGGATGGTGGAACCCGAGAAGTCCTACGTGTCGACCCAAACGGCGGGGACTGTGGGGTACCTGCCTCCCGAGTATATGGAAGGGTTTAGGGTAGCGAGTGTAAAGGGAGATGTATATAGTTTTGGGGTCTTGATGCTTGAAGTGGTTAGTGGAAGGAGACCGAATTGGCCGGTTAAGGGGGAGGATGGGAAGGAGGTTTCTATGGTGAGGTGGGCCCGCAAATTGGTGGATGTGGGTCGGGGCAATGAGGTTTTGGACCCGGGTTTGGGTGATGTTGAGGTAGGGTTTTTTATGGATGTGGCATGTAGGTGCACGGATGATGATGGGAGAAGGAGACCGGGCATGAGGGAGGTGGTTTCAATGTTGGAAGCGGAGATCAGTGTGAGATGA

Protein

Gene

>AfisC6G02022
ATACTATTGATGATGCTTAAGGAGACACCTCTCTAACAGTAGTAGGTTTGATTATACTTTAGTATCTTTGATTATGGCTCATGGAAAAAGCAGCATCAACAATCCAAAAGTAAATTCAAAGTCTACCTTGAAAGATTGTTCACAATTGGTTCTGTAACGTAAAAGGACCGGAACGCGGTTTACAAACCTAAATTTTAACCTATTCCCAACAGATATTAGGTTGACTTTGACTTCAATTCTTAAGAAGTCAACTAGACTGCCATCGTCTTAATCCCTGAACCCTGACCCTAGCTTTACCCCCAATTTCAATATGAACGGTGTCTTCCAAGCGCTAATCGCCGCTACAGTCAGCTTCCTACTAATCACATTCATCTTCCTGTTCTTCACCCTCCTCTGCCGCCGGCGCCCGCGGCCTAAACCCGCAACCCAATCCCCACCAAACCGTCCACGCGTCCCATCCACCTTCTCCTCCTTCTCGCCCTCCCTCCCCCGCATCTCCCTCTCCACTGTCGCCGCCGCCACCTCCAACTTCTCCCCTTCCCTCATCCTCGGCGACGGCGCCTTCGGTTACGTCTACAAAGCCACCCTCCCCACCAACCTCACCGTCGCCGTCAAAAAGCTCGAACCCACCTTCGCCTTCAACCACGACGGCGACCGCGAGTTTCGCGCCGAACTCGAAACCCTAGCAAAGATCCGCCACCCGAACCTCATCAAACTCCTCGGATTCTGCTCCTCCGGCCCAGATCGCGTCATCATCTACGAGTTTATTCAAAACGGTAGCCTGGATTCCTGGATCCACGAATCGGATCCAAATCCAAGCCAGCTAACTTGGGGAACCCGGTTCCAGATAATTCTAGGAGTAGCCAGAGGTTTGTCTTTCCTTCACAATGAGTGCACGCCATGTGTTATACACAGGGACATAAAGTCAAGCAACGTGTTATTGGATGCGGGTTTTGAACCCAAGATAGCAGATTTCGGGCTTGCGAGGATGGTGGAACCCGAGAAGTCCTACGTGTCGACCCAAACGGCGGGGACTGTGGGGTACCTGCCTCCCGAGTATATGGAAGGGTTTAGGGTAGCGAGTGTAAAGGGAGATGTATATAGTTTTGGGGTCTTGATGCTTGAAGTGGTTAGTGGAAGGAGACCGAATTGGCCGGTTAAGGGGGAGGATGGGAAGGAGGTTTCTATGGTGAGGTGGGCCCGCAAATTGGTGGATGTGGGTCGGGGCAATGAGGTTTTGGACCCGGGTTTGGGTGATGTTGAGGTAGGGTTTTTTATGGATGTGGCATGTAGGTGCACGGATGATGATGGGAGAAGGAGACCGGGCATGAGGGAGGTGGTTTCAATGTTGGAAGCGGAGATCAGTGTGAGATGATACATTAGGTTGTGTTGCTAGAGGCTTGTGTATGATAATTCTTACCGTTTGAAAAATAAGGTATTTCAAACAAGGTAGGCACGTTATGTTTTGTACGTACATACATACATATGAAGGTAGTAAGGTATGGTGAAATCGATATAGGATTGAGTACGAGTGAGGTTGCTATGAAGTTGAAAGCCAAGGCGATGATAGTGAGTATTTATGTGTAAATGCACGAATTGTGTGTTTACGATTGGTGATGACAATGATAAGATATCTAATCTGACAATTGGAGGTGAGTTTTATCATGCAACCATACCTTATGGTCCATGTTTCCAAAATGAAATTTACATGCTTTGTGATTATGTAAAAAGTCAAATAAAAAATAAATATAGAAAGATTTTTATAAAACGGATGTCGTGGAAGTTTT

Functional annotation

Database	accession number	e-value	annotation
nr	KAF3330573.1	7.3e-98	leucine-rich repeat receptor protein kinase EXS
Swissprot	Q9ZWC8.1	2.2e-70	BRASSINOSTEROID INSENSITIVE 1-like protein 1
trEMBL	A0A833QZ52	5.3e-98	Leucine-rich repeat receptor protein kinase EXS

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G42440.1	47.50	6e-85	311		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G02022	AT5G42440.1	360	159	9	7	348	6	353	47.50	6e-85	311
AfisC6G02022	AT1G55610.2	364	187	9	9	348	778	1135	40.38	2e-71	266
AfisC6G02022	AT1G55610.1	364	187	9	9	348	778	1135	40.38	2e-71	266

Ortholog group

Species	Genes
Allium cepa	g62878.t1
Allium fistulosum	AfisC6G02022
Allium sativum	Asa8G04612.1
Arabidopsis thaliana	AT5G42440.1
Oryza sativa	LOC_Os11g06780.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	80	346	154.3	3.3e-45

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0001653	F	peptide receptor activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005496	F	steroid binding
GO:0005524	F	ATP binding
GO:0005768	C	endosome
GO:0007166	P	cell surface receptor signaling pathway
GO:0009506	C	plasmodesma
GO:0009507	C	chloroplast
GO:0009554	P	megasporogenesis
GO:0009556	P	microsporogenesis
GO:0009611	P	response to wounding
GO:0009729	P	detection of brassinosteroid stimulus
GO:0009734	P	auxin-activated signaling pathway
GO:0009742	P	brassinosteroid mediated signaling pathway
GO:0009826	P	unidimensional cell growth
GO:0009911	P	positive regulation of flower development
GO:0010224	P	response to UV-B
GO:0010233	P	phloem transport
GO:0010234	P	anther wall tapetum cell fate specification
GO:0010268	P	brassinosteroid homeostasis
GO:0010305	P	leaf vascular tissue pattern formation
GO:0010584	P	pollen exine formation
GO:0019199	F	transmembrane receptor protein kinase activity
GO:0031347	P	regulation of defense response
GO:0042803	F	protein homodimerization activity
GO:0043234	C	protein complex
GO:0045851	P	pH reduction
GO:0046777	P	protein autophosphorylation
GO:0046982	F	protein heterodimerization activity
GO:0048366	P	leaf development
GO:0060548	P	negative regulation of cell death
GO:1900140	P	regulation of seedling development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network