Detail information of AfisC6G02192


Location
GeneChrStartEndStrand
AfisC6G02192chr6365341727365353222-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020245889.15.0e-261LOW QUALITY PROTEIN: protein NLP2
SwissprotQ0JC27.22.0e-198Nodule inception protein-like protein 2
trEMBLA0A5P1FI092.3e-239NIN-like protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G43500.148.180.0 667NLP8Plant regulator RWP-RK family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag5053.t1
Allium fistulosumAfisC6G02192
Allium sativumAsa8G04496.1
Arabidopsis thalianaAT2G43500.1; AT2G43500.2; AT3G59580.1; AT3G59580.2
Oryza sativaLOC_Os04g41850.1; LOC_Os11g16290.1; LOC_Os11g16290.2; LOC_Os11g16290.3; LOC_Os11g16290.4; LOC_Os11g16290.5

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02042.12RWP-RKFamily48052888.61.7e-25
PF00564.21PB1Domain67075054.66.6e-15

Gene Ontology
AccessionOntologyName
GO:0006351Ptranscription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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