result

Gene information

Detail information of AfisC6G02391

Location

Gene	Chr	Start	End	Strand
AfisC6G02391	chr6	404609680	404611701	+

Sequences

CDS

Protein

Gene

>AfisC6G02391
ATGCAGATGGCATTTTCTATCACAAGGCAAAGTGCTGTAGGCGGTTCAAGAAGGTCTGCTGGTGTTAAAGGATCGTCTAGTTCAGTTGAAAAGCTTGGAAGGGAGATGCTAGAGTTAAGAATAAAAGACAAAAGAAGGGACCTGGAGGATGACAATGTAAGATTCTAAACTGAATTACCACCCCATAAGGTCATAAATCATAAATTCTTGTAGGGTGGACTTAGAAGATTTGCATCATGCCATCTTACACAGTATATAGAGCATGAGTTTTTCCATAATCGCAAAGTATGGTTTACTTTACTTTAGGATTTTGAGCTAGATGTTGTAGATGGAAGGGGAGCTAAAGCTGGGCATATAATTGCCACTACCATTGGTGGTCAAAATGGTCATCCTAAGCAGGTTCAGAATTATTCTTCAATTTTCCTCTTACACATAACCGAATCATTTTCAATAGCTAATATGTAGACATTAGTAATCATTCAACAATTGCTCTATCAGGCAATTACATACATAGCAGAACATGTAATAGGAACTGGGTCTTTCGGGGTTGTATGTTAGGTATCTTCCATTTCTTTGTCTAGAGAAAAAGTATATTGATAACCATATGAGAATGTTTTCTTTTTTCCTTCAGGCCAAATGCAGAGAAACGGGAGAAATAGTTGCAATCAAGAAGGTTCTTCAAGACAAGCGTTACAAAAACAGAGAGTTGCAAATAATGCACATGTTAGACCATCCTAATATTGTTTCTCTTAAGCACTACTTCTTTTCTACAACTGATAGGGAAGAAATCTACCTGAATCTCGTTCTTGAATTTGTGCCCGAGACTGTCAATCATGTTGTTAGGCAGTATAGCAAGATGAGCCAACATATGCCTCTCATATTTGTTAAACTATATACCTATCAGGTATGCCTTATTCATGTTAACATCATATAAAACATAGAAAATAATGTTCACAGAAATTCTAACACATTTAATTATGTATATTCTAGCAAATGCAGTGTTGTGACTAAGTGAATTGAATGCTGAGTTTTCATGTCTACATTGGTGTAGATGAATGTATATTTTAACAAAACCATTGTATCAGATATGCAGATCTCTTGCTTACATTCACAACTGCATAGGCATTTGCCATCGAGACATTAAACCTCAAAATTTGCTGGTGAGTTTAGTTTATAAACAATCCCATGGTGGTTCTCATTTCTGTGTATATGTATTTTTGCATTTATTTTTTTGAAGTTGCCTGAGTTACAAAAAGTCCTTTCATTCTGCCTGATTATCATATGTGCATTATTATTATCATTATTATTTTTTAAAGTGCCTTGGAGAAAATATTATAACAAATTGTGGTACATACTATGTTTAAGTGGTGTATTTAGGTTTAATATTGCTGTATTGCTTTGGCACTTATGTAGCCAAGTTCTCCACAAAAGAATTTTTTTTTAAGATGCTATTTCTAAAATCTCCATGGTATTATTAGAATTTTATGACTGATTAGCTAGCAATAAAAATTGCAATTACACAACATAATCGTACGGTGCTAGCTGATGCAGCGTGAAGTAGAAAAGGAATATAATCGTAAACCACAAAGAAAAAGAAAGTTAAAAATTTAGAATCCATCAAAAATAATCATAATAATTTCTTGGTGTGAAGTATTTCTCTTGTTGGTTTGTAATATGCTTTACCTGTTTCAGGTAAATCCACATACTCATCAGCTTAAATTGTGTGATTTTGGTAGTGCAAAAGTTCTGGTAAGTCTTCATCGGCCTTAAGCATATGTATAAAACCATTGAACTAAGTATGAATTGCTATGATATTTGTTACATTATTCAAGTGAAAGGAGAGCCAAACATCTCTTATATCTGCTCAAGATATTATCGTGCTCCGGAACTCATAAATTCATAGATATTCATCTTTCCTGTAAATGTTATTCAGTTGCTGAAGCTTATGTACCATGTACCACCAACTGCCGGTTATCATCAGAGCGTGTGGAACAAGATAGGTCAAATATGCCCTTTTCTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020098386.1	1.1e-99	shaggy-related protein kinase kappa-like
Swissprot	Q9FVS6.1	2.2e-89	Shaggy-related protein kinase 42
trEMBL	A0A6P5FQ12	7.8e-100	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G09840.1	69.43	8e-95	343	AtHIR1;ATSK41;HIR1;SK41	shaggy-like protein kinase 41

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G02391	AT1G09840.6	229	69	1	11	239	8	235	69.43	8e-95	343
AfisC6G02391	AT1G09840.5	229	69	1	11	239	8	235	69.43	8e-95	343
AfisC6G02391	AT1G09840.4	229	69	1	11	239	8	235	69.43	8e-95	343

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	89	239	112.8	1.6e-32

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0002119	P	nematode larval development
GO:0005829	C	cytosol
GO:0004674	F	protein serine/threonine kinase activity
GO:0004842	F	ubiquitin-protein transferase activity
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0007052	P	mitotic spindle organization
GO:0009507	C	chloroplast
GO:0009742	P	brassinosteroid mediated signaling pathway
GO:0009792	P	embryo development ending in birth or egg hatching
GO:0009933	P	meristem structural organization
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0030178	P	negative regulation of Wnt signaling pathway
GO:0032880	P	regulation of protein localization
GO:0040010	P	positive regulation of growth rate
GO:0040011	P	locomotion
GO:0042538	P	hyperosmotic salinity response
GO:0046777	P	protein autophosphorylation
GO:0060070	P	canonical Wnt signaling pathway

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network