result

Gene information

Detail information of AfisC6G02692

Location

Gene	Chr	Start	End	Strand
AfisC6G02692	chr6	469170955	469176489	-

Sequences

CDS

Protein

Gene

>AfisC6G02692
CATTTTCGTTTCTATTTCTCAAATCCCTAAATCCTAAATCCACATTCAATCCCTCTTCCATTCTCTAGATCTTGCCATCTCTACTCAATTCTCAGTTAATCCCAATCCCTTCATCATTCCTTCACTAAACCTTTCACCAAATGATGTACAGGTTGCAAGCCCTTCATCAATCGTTCACTTCGGCATGTGAATGGAGGGTAGCGGCTGCTTTTCTGGGTGTTCGACAGTGAATGTTTGAAACCATGAAACTAGGGTGGAAAATCTTGGTGTTTGATGCTCGATTGGAAGAACGGAGGTCGTATTTGAGTTCGGGGAGGAGTTTGGCACCATGGAGGACGAAATAGTGGAGCTCGGCTTGGGATGGGGAGGTGCGACCTGATGTGTACGGGCTTGATTCAAGGTGGAGTTGCTTGTTCTTTGAACAGTTCCGGAGTTAGTAGACTCTTGGAAGTCAGGATTGGCATACAAGCACATGGAATATAAAGAAAAGAAAAGGCTAATCAATGTAAATTTGATGTTAATTCTAGGGACAGTAATGCTTCAGAAGTTGTTATACACAGGTGAAGCATTTTCAAAGTTGAAATTTTAATAAATTGAAACAACCTGTTATATGAATAACCATATGTTCTTTTATATAATTTAAGTATAACTCTATTTGCCATTTTATTTATAATATTATTTGCCAAGTTATGAAGAAATGGTTGAGGACTCGTGTTTTGGTTTGCAGGGGAGCAGGAACCGAGTTCTATGAAAACCTTTTCATGGGTTTTCCAATACAAAATAATGATTGTATGCAGTTAATTATCAAAAAAGAAGTTTTTTTGCTAAGAGAAGATTACAAGAAAAGATTGGTTTGTGGTCACTTAGATTTACCTATCAGAAGTGATGTTATCGATTGGATTTGGAAGATACATGTTCATGTTTTTAATTCCAACTTTGTTTGTTTACGTTGTTCTTCTTCCTTTTTATTTAAGAGACAAAGAAATTTCGTGCGATAAAAAGAATTTACTCTGCCACCCAATCTTTCTAAATTCCAATTAAAAGTAAATAAATAACAATTCATATAACATGAAATAGGCTATGTTATAACATGAAATAGGCTATGCAATGACACAAGCATGACCAGTGTAACACAACACAAATTACAACTACATTATACTAATTGAACTCATCTATAATAAAATGTATAGACAGTTGCATATTTTGTGCATGTGTGTGAGGAAGAGATTATTTAAGTTCAGACTTATTTTAACTGAATTAACCATTTGACATTGCACTGTTTTTAAATTGAAGAATGCTATCATATTGCGTTTACAAACAGTTTTGTTGGTCTGTGGTGGATTATATCTTATAAATCATAATCCGCTGACCTGAATAATCTGAAACATAATTCATTTGAAATGCTGTAATTTTTTCTTTTCTTTTTACATATGCTCTTACTGAGTGGAATCAACTTGAATGCTAAAGGGATCATATTTTAGTCAGTGATCAAGTGAATAGTTTATTAGTACATACTGTTATATGATGTAGAGTTTCTTGCAGATTGGTTTAGTTGCCATGGTTGGTCGCAGAGTGATTTTTTCATAGCTTCATTTAATGAGTATATAAAGGGCTGCACAAAGTATGGGTTGGGTCGGGTCAGACCAAATATTTCATCCGACCCGCATATGTATGGGTTTAAGGTAGCTCAATCCATATCCGACCCTATATGAGGTTGGATATGGGTTGGGTCGAAGTATGGGTTGGGTCGGGTTTAGTAGGGTTGGGTTGGGTTGCATGAATCTAATAAAAAATGAGAATATAAGGGAATATTTTCAAAAAATAACATTAAAATGTTCAACATAATATATTAGATTTTAGCTAGCATAACGCACTTAAACTAACTAATTCATTATAACATATATTTTATTAAAATTTCATTGTAAAACACATCATATGAAATTAGTTCACTACATAGTAGAACAAGTGTTTCATTTTAAAATACATTAAAATGCCCTTTGGAATATCTTTGTCAAATTCTATCTTGTTTGGGTTGACATATAATATGCTTTTTCATATATTTACTGTAGAATACATAAATATTATTCTAGGATTAGACTATTCTAATTTTAAGTGTATTGATATTAAATTAGGTTTTTAATTTAGGGTTGGGTTGGGTTAAAGTAGGGTTGGATTGAACAAAATAACACACCCGACCCATATATAGTATGGGTTACAAATTGTAACCCATATCCGACCCGAACTAGGATGGGTTGGGTTGGGTTTATGTGGGTTGGGTCGGGTTGGTGGGTTGGGTCGGGTTGGATATGGGTTGTGTGCAGCCCTAAGTATATTCAAGCTTATACCAACTTTTGGCCTTAGTCATTTACCCAAATAGTCCTTTTTGCAATTTAGTATCCTCGAAACTACTTCGCCACAAATATTGATGGCTTATTATTATAGTATCAACTAAATCATGCAAAAATTTCAAATAAGAACTTAATTTTCATTCGGATAAGTGTTTGGTGATTCCAAGTTGGTCATGGGTAAGTTACTATGTAGGAAGTAAAACATAAAACATGTAATATATGTATGAGTGCGCGCATGTATTTAGAGTTTCAACCCAAATATACATTATACTTAATAATATATTCATAATTTTCTAAAGACCTGAAACCTAAAATGCAGAGTACAAGAAATCTTATTTTTAATGTTTATTATTAACTGGAAAGGAAACATAACATTTTCGCACCATAACTATGGGCATCATCATTCAACATTATTATAGATCTTCAGACTATGCTGCTGATTACTTAACTTTCAGCTAACTTATCGCTCAGTTGCTTTCGATAAACCTGAATCATTCCATTGCAATCATGCTTTATGTGGAGTTTCTTCTCCAGTATAGTTTTGTATTGATCATCTGCTGCATCAATGCTTTTCATAAATCCAACCTGAATAGAAAACAAAATCAGATTTTAACATCAAATCACCTGGTCATTATATAAAATATCAGGCATATCTTACCTGCATTTTGAGCAAACTAAATTCTTCCGCACTTAAAAATCCATCACCATTTGTGTCTAGTCGCTGCATAAGCTCTTCAGCATCTTTGCCTGCAGCTCCAAGCTCTTCCATAACCGTTGTCAGTTCCTCCATACTTATTTGACCATCACCATTTTCATCCAGAAATCTAAATAATCAAGCATTTGGGTCAATTTTAAGTTCTTCCTTTTTATTAGCTGATGGTAGATCTTTGAGATGTAGTGCAGTATTATCTGCTGCAGCCAACATTATATCCTTCAGTCTTTTTGCCTGCACATCAACATGTGTTTGGTCTTTATTAAGTCCATTTCTACATTCTATCTATAAATTTGGTGTACCCTGTTATAACATAGAAAATTATGGAAGTATCATCGGCCTTTTTGAATAAATATTTATGTTATTATAATTCATTGTATTATTACACAAACTCTTGTTCTGTAATGTTTACCTCTTCGGGATCATGAATACCGCCTTTGTAAATAGAATGTGATGCAGAACCGAATTTAATAGTTGCAATCTGTGTAGGCATATCCATTTATGTAGTATTATTTTGGTTTCTATTACAGGGGTTCGATGTGCCTCTATGGAAGAAAATTCTTGGTAGAAAGTTGACAGACATGTAATTGTCTCAATTTTGATAAGCTCCTGATTACTGTCATTCAGGTTCAATATATTAACATTCAGTTGGTATTTTCTTATTACTTTGTAGGTGGCAAGCCAGACGATATAACAGTGATAGTTGGTCAAAGAGGCCGTTGGATCAACTATCGCGTGGCATAAAGACTTCGTCTCTTCTAGTAAATTTTCCTTTTCAACTGTAAGAGAAGCCAAAGCCGTAAGGTTCTCAATCTGGATTATTCATTCTTGCTATTTGTTAGCTTTTATTTTTGACTGGATTAATTGTAAATAATTGTCTTAAATCAATGAAGCAGGGTTGAAAAAAAAAGACTGGATGGAATATCTTGTTTGTTAGTTTTAATTAATTTATTGGTCCATATGTTTGGGATATTGAGATCACCATTAGTTAGATTGTTTACAGAGTTAATTTTTATTCAGGTTTACACTTTGGTGATTTAAGATTTTGGGGAAAATATCAGGAAAGATTTGTCTTACCTCTCTCTTTAAAAAAAATTCAGGGTTCGAACTCTGATCTTTGGACTCACAGTCCGGGCCATCGACAACGTTTTCAATTTTTTAGTTTTGACTAAATTGAATTCTAACATATAGCTAGTATGATATCCTAGAACTGACTCATAGTTTTACATGAACTTCGCAAAAGAAATATAAATTCTCCTTCATGCAGTCTCATTATTTGTTGTTTTCGAACAGAAAACATGCTTCTAACCGCAGATCAGAGAACAATAAAGCTTGTAGATCTCGGTTTGGCAAGGGAGGAAACACTCACAGAGATGATGACAGCAGAAACAGGAACATATAGATGGATGGCTCCAGTGGTACTGTTCGCAATATTTCATATATGATCAATGCAGCTTTTCACTACAATCAATTGATATTGTAAGTGAATGCTAAATAATTTGCATGCAGTTGTACAGTACCGTGACTTTGAGGCATGGTGAAAAGAAACATTATAATCATAAAGTGGACGTTTATAGCTTTGCAATCGTGTTATGGGAACTGCTGCATAATAAACTCCCTTTTGAAGGCATGTCGAATCTTCAAGCAGCATATGTAGCTGCTTTTAAGGTAATAGGTTTTGAACAATTTGGAACTTAATTACCAAATCATACTCCCTTCAGAGATTGTCACCCTTATCGTTTTCTTTGGTAGTTATGCTATATAGAGGATAAATGCCGAATCATGTCTTCTTGTTATCTTTGGGTTTTCCAATATGACCCGATTAAATTTAACATTTTTTTGATAGAATATTTGCCATTTGGCAGAAGTGCACATTTTTTAGTTAAATTGCTCCAAATGCACTCCTACAGCAAACTACTGTATTAGACTGAGAAACAATATCAACGTCTTTGATACCTAACCAGAAATGTGATTTACCCATGAAATCTAGTCACGGTTATAACTTAAATGGTTTGTGTCAAATTAGAATTTTCATTTTTTATAGTTAACGCAAATATGAACTTGTATAATCAAAATGCACATAAGATCCTCTATCCCCAAATTACATATTCCCCTTGTCCTCTCCCCTAATCTCCACCGTCCAGATTATCAATAATTCAAATTAATTGAAATTTGTTTATAATAAATGAATGAAGATGATTCAAAGCGGCTTATTTTGGTGTTTATCATCCGATTTATCCTTTAGACAAGCATCTGTCATTTGTTTAGATAGTGTGAAATTTACCAATGAATACATCAAAGATGCTTGTTTTTCTTTCCGAGGAAGAAACAGAGACATCCATCACCACATATGAGCCTTGTTGTTGTCTTTCCGAGGAAGAAACGGAGATGCAGACTATCAAAGAGGCCGTTGGATCAACCGTCGCGTGGTATAAAGACTTCATCTCTGTGGTATAGTATGATTGTACTTAGAAC

Functional annotation

Database	accession number	e-value	annotation
nr	ACR35837.1	3.3e-43	unknown
Swissprot	F4JTP5.1	1.2e-16	Serine/threonine/tyrosine-protein kinase 46
trEMBL	A0A2S3GQG9	2.4e-43	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G40540.1	87.10	2e-46	179		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G02692	AT5G40540.1	93	12	1	93	156	248	87.10	2e-46	179
AfisC6G02692	AT5G50180.1	95	13	1	95	150	244	86.32	4e-45	175
AfisC6G02692	AT3G27560.1	93	15	1	93	156	248	83.87	4e-44	172

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	3	85	52.7	3.4e-14

Gene Ontology

Accession	Ontology	Name
GO:0007017	P	microtubule-based process
GO:0016020	C	membrane
GO:0005829	C	cytosol
GO:0004706	F	JUN kinase kinase kinase activity
GO:0004712	F	protein serine/threonine/tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0005813	C	centrosome
GO:0005874	C	microtubule
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006964	P	positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria
GO:0007249	P	I-kappaB kinase/NF-kappaB signaling
GO:0007256	P	activation of JNKK activity
GO:0007257	P	activation of JUN kinase activity
GO:0007391	P	dorsal closure
GO:0008283	P	cell proliferation
GO:0009658	P	chloroplast organization
GO:0010506	P	regulation of autophagy
GO:0016318	P	ommatidial rotation
GO:0018193	P	peptidyl-amino acid modification
GO:0031434	F	mitogen-activated protein kinase kinase binding
GO:0031435	F	mitogen-activated protein kinase kinase kinase binding
GO:0031625	F	ubiquitin protein ligase binding
GO:0042803	F	protein homodimerization activity
GO:0043525	P	positive regulation of neuron apoptotic process
GO:0046777	P	protein autophosphorylation
GO:0048365	F	Rac GTPase binding
GO:0048519	P	negative regulation of biological process
GO:0048802	P	notum morphogenesis
GO:0051607	P	defense response to virus
GO:0061057	P	peptidoglycan recognition protein signaling pathway
GO:0071222	P	cellular response to lipopolysaccharide

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network