Detail information of AfisC6G02726


Location
GeneChrStartEndStrand
AfisC6G02726chr6476498376476503737+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_009414116.15.7e-86PREDICTED: chromatin remodeling protein EBS isoform X2
SwissprotF4JL28.12.4e-81Protein EARLY BOLTING IN SHORT DAYS
trEMBLD6MKD62.4e-86Transcription factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G22140.171.283e-83 305EBSPHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein

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Ortholog group
SpeciesGenes
Allium cepag370462.t1
Allium fistulosumAfisC6G02726
Allium sativumAsa8G04020.1; Asa8G04021.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF01426.15BAHDomain2313577.94.9e-22
PF00628.26PHDDomain14018841.48.9e-11

Gene Ontology
AccessionOntologyName
GO:0000785Cchromatin
GO:0000976Ftranscription regulatory region sequence-specific DNA binding
GO:0003682Fchromatin binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005677Cchromatin silencing complex
GO:0006342Pchromatin silencing
GO:0008270Fzinc ion binding
GO:0009640Pphotomorphogenesis
GO:0009845Pseed germination
GO:0009911Ppositive regulation of flower development
GO:0031507Pheterochromatin assembly
GO:0035064Fmethylated histone binding
GO:0035067Pnegative regulation of histone acetylation
GO:0048579Pnegative regulation of long-day photoperiodism, flowering

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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