Gene information

Detail information of AfisC6G02806

Location

Gene	Chr	Start	End	Strand
AfisC6G02806	chr6	489346879	489347506	+

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	THU64695.1	2.7e-31	hypothetical protein C4D60_Mb01t29160
Swissprot	O22174.1	2.9e-30	Ethylene-responsive transcription factor ERF008
trEMBL	A0A4V4H7Q1	2.0e-31	AP2/ERF domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G23340.1	54.61	2e-32	134	DEAR3	DREB and EAR motif protein 3

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G02806	AT2G23340.1	141	43	3	1	123	33	170	54.61	2e-32	134
AfisC6G02806	AT3G50260.1	133	41	4	1	123	26	148	54.14	2e-31	130
AfisC6G02806	AT4G06746.1	120	41	2	1	120	41	149	56.67	2e-29	124

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	2	44	31.1	1.9e-07

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0042742	P	defense response to bacterium
GO:0005634	C	nucleus
GO:0009414	P	response to water deprivation
GO:0009753	P	response to jasmonic acid
GO:0009793	P	embryo development ending in seed dormancy
GO:0009825	P	multidimensional cell growth
GO:0009834	P	plant-type secondary cell wall biogenesis
GO:0009861	P	jasmonic acid and ethylene-dependent systemic resistance
GO:0009863	P	salicylic acid mediated signaling pathway
GO:0009873	P	ethylene-activated signaling pathway
GO:0010200	P	response to chitin
GO:0044212	F	transcription regulatory region DNA binding
GO:0010941	P	regulation of cell death
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0034605	P	cellular response to heat
GO:0043565	F	sequence-specific DNA binding
GO:0045088	P	regulation of innate immune response
GO:0071497	P	cellular response to freezing
GO:1900030	P	regulation of pectin biosynthetic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09286	EREBP; EREBP-like factor	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network