result

Gene information

Detail information of AfisC6G02853

Location

Gene	Chr	Start	End	Strand
AfisC6G02853	chr6	497610796	497612199	+

Sequences

CDS

>AfisC6G02853
ATGCTTCCAACATTTATTGCCAATCAACATTGCTTCTTCGATCACACAACCAAACTACTTCGAAATGAAGAAAACACCATATGGTTTAAAGGGCCATGGTTCATGGGAATGGATTTTTTACTCACATGCAACCCAGAAAATGCAAAACATATCTTTAATACCCATTTTGCCAACTACCCTAAAGGAGACCAGTTCATAGAAATGTTTGATATATTGGGAGATGGTATCTTTAACGTTGATGGTGATTCATGGGCTACTCAAAGAAAAATGGCTCAATCTCACATGACCCATCCAAGGTTTCGATCATCAGTTGAAGTATGCACTGGAAACAAGGTGGCGAATGTGCTGCTTCCTATTCTGAATCAAATGGCTGGAACCGATAAGGTAGTCGATCTGAGCGATGTATTTATGAGGTTTACTTTTGATACCACTTGCGATCTAGTACTTGGTGTTGATCCTGGTTCCCTTGCCTTTAATTTCCCAACAGTCCCTGTAGCGAAATGCATAGATAATGGTGAACAGGCTATACTTTTTCGGCATATAGTACCTGCTATATGGTGGAAATTGCAGAGGTGGCTGAGAGTGGGGAAAGAAAAGAAGCTAATAGAGGCCAGGGAAGAAATTGATGATTTCATAACACAATGCATTAAGAAGAAAAAAGAGGCCACTCAAACAGTTAGTACCACTATTGAAAAAGAAGGGCCTACTGATCTGCTGACTCCATATTTGACCCATAATGACTCAATTTTTGATGACAAATTTCTTCGAGACACATTGCTTACGTTTCTTGCTGCCGGCAAGGATACTACAGGTGCTGCACTTGTTTGGTTTGTTTGGTTGGTTTGCAATAACCATCAAGTCGAAAATAAAATATTAAAAGAGTTGCATGGTCTTCAGCCGGATAAGAGTATTGATGATGAAATGAGAGTTTTTAACTCAGAAGAGACTGAAGCAATGGTTTACCTACATGCAGCGATATGTGAAACCTTAAGGCTGTACCCATCAGTCCCAATGAACCACAAAGTAGCTGTAAATACTGATGTGTTACCAAGTGGACATAAAATTAAGGCTGGAACGAGAATTATCTATCACATGTATGCTGCAGGTAGAATGGAGAATATATGGGGAAAGGACTGTTTAGAGTTTAAACCTGAAAGATGGATTACTGAGAAAGGGACAGTGAAACATGTGCCGTCCTATAAATTTATCGCATTTCACAGCGGGCCTAGGTCTTGTTTAGGTAAAAGTATGGCGTTTTCTCAAATAAAGTTAGTGGTGGCTGCCATTCTTTATAACTTTAGAGTCCAACTTGTGGAGGGACGTGTTGCTGAACCTACAGCTTCTGTTGTTATCCAACCGAAAGATGGGTTGCTTGTTAAGCTAAAGAAAAGAAATCACAACTAG

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256136.1	3.5e-172	alkane hydroxylase MAH1-like
Swissprot	A0A140IL90.1	8.2e-118	Cytochrome P450 96T1
trEMBL	A0A5P1F8B5	2.5e-172	Cytochrome P450

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G39480.1	45.28	9e-121	430	CYP96A9	cytochrome P450, family 96, subfamily A, polypeptide 9

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G02853	AT4G39480.1	466	236	5	13	464	53	513	45.28	9e-121	430
AfisC6G02853	AT4G39490.1	477	258	3	1	464	41	516	42.98	1e-117	420
AfisC6G02853	AT2G23180.1	477	258	4	1	466	42	514	42.77	4e-117	418

Ortholog group

Species	Genes
Allium cepa	g112434.t1; g403812.t1; g523837.t1
Allium fistulosum	AfisC6G02853
Allium sativum	Asa8G03933.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	33	454	212.4	9.6e-63

Gene Ontology

Accession	Ontology	Name
GO:0006952	P	defense response
GO:0005783	C	endoplasmic reticulum
GO:0005488	F	binding
GO:0055114	P	oxidation-reduction process
GO:0010025	P	wax biosynthetic process
GO:0010345	P	suberin biosynthetic process
GO:0010584	P	pollen exine formation
GO:0016709	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
GO:0018685	F	alkane 1-monooxygenase activity
GO:0035336	P	long-chain fatty-acyl-CoA metabolic process
GO:0042761	P	very long-chain fatty acid biosynthetic process
GO:0048437	P	floral organ development
GO:0048438	P	floral whorl development
GO:0048827	P	phyllome development
GO:0080133	F	midchain alkane hydroxylase activity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network