result

Gene information

Detail information of AfisC6G02854

Location

Gene	Chr	Start	End	Strand
AfisC6G02854	chr6	497616544	497618912	+

Sequences

CDS

>AfisC6G02854
ATGATTTATAACTCTAACATTCTCCTTGTAGCAGCCACTTTATTCTTTGCTATCTACTTATTCGTAAAATTATGTAGCAACAGAGTCTTCATAATTTGGCCAATTTTTGGTATGCTTCCAACCCTTCTCGCTAATCAAAATCGTCTCCTCGAACACTTGACCAACATAGTCGATAATGACAAAAACACAGAGTGGTTTCACGGCCCGTGGTTATCAGGAATGACATATTTATACACTAGCAATCCAGAAAATGCAAAACACATGTTTAATATCCATTTCTCAAATTACCCTAAAGGCGATGGCTTATATGAAATATTTGACGTTTTAGGCGATGGCATTTTTAACGTTGATGGTGAATCGTGGGCTTCTCAAAGAAAAATGGCTCATTACCACATGAGCCATCCACGCTTTAAAGCATCAGTTGAAGAATGTACTGGAAACAAAGTGGCAACGATGTTGCTTCCTATTTTGGATCGTATATCTGAAACTGAAACAGTAGTTGATCTTAGCGACATATTCATGAGGCTTACTTTCGATATTACTTGTGATTTAGTACTTGGTGTTGACCCTGGTTGCCTTGCCTTTGATTTTCCATTAGTTCCCTTTGCGAAAGGTATGGATACCATCGAACAGGTCCTTCTTTTTAGACATATTGTGCCTACTGTATGGTGGAAATTTCTGAGGTGGCTGCGAATTGGGAAAGAGAAGACACTGATAGAGGCTAAGGAAGAAGTTGATAATTTCATAGTGCTATGTATTCAAAAGAAAAGAGAGAGTATTATTAATGGTAGCTCTGAAAGCAATATAGCAGGACCTACCGATCTATTGACCCCATATATGATTCAGAATGACTCAAATACCAAATTTCTGAGAGATTCATTGCTTGCATTCCTTGCAGCTGGGAAAGATACCACAGGAGCCGCACTTGTATGGTTATTTTGGTTGGTTTGCAATAACAAAAGAGTTGAAAATAAAATACTTGAAGAGTTGAATGGTCTTAAGTCATGTAATAATACCGATAGTAGTGAAATGAGAGTTTTTGAGTCAGAAGAGACTGAAGCAATGGTTTACTTGCATGCAGCTGTATGTGAAGCACTAAGGCTATATCCATCAGTTCCATTTAACCATAAAGTTGCTTTGAAGGCCGATGTGTTACCAAGTGGACATAGAGTTCGAGCTGGAACTAAAATTATATATGGCTTGTACTCTGCAGGCAGAATGGAGAATATATGGGGAGATGACTGTTTAGAGTTTAAACCTGAAAGATGGATTACAGAGGAAGGGACACTGAAGCATGTGCCTTCGTATAAGTTTATTGCATTTCACAGTGGACCGAGGTCTTGTTTGGGTAAGAGTATGGCGTTTTTCCAGCTGAAGCTGGTGGCTGCAGCGATTCTGTATAATTTTAGAGTAGAATTGGTGGAAGGACATGCAGTTGAACCTAAACTTTCGGTTGTTATTCAAGCGAAAAATGGGTTGCTGGTTAAGTTAAAGAAAAGAAACATTAACTAG

Protein

Gene

>AfisC6G02854
GGATAATTGAGCAAATTTTCAAAGCACACAAGAAAAGAAATGATTTATAACTCTAACATTCTCCTTGTAGCAGCCACTTTATTCTTTGCTATCTACTTATTCGTAAAATTATGTAGCAACAGAGTCTTCATAATTTGGCCAATTTTTGGTATGCTTCCAACCCTTCTCGCTAATCAAAATCGTCTCCTCGAACACTTGACCAACATAGTCGATAATGACAAAAACACAGAGTGGTTTCACGGCCCGTGGTTATCAGGAATGACATATTTATACACTAGCAATCCAGAAAATGCAAAACACATGTTTAATATCCATTTCTCAAATTACCCTAAAGGCGATGGCTTATATGAAATATTTGACGTTTTAGGCGATGGCATTTTTAACGTTGATGGTGAATCGTGGGCTTCTCAAAGAAAAATGGCTCATTACCACATGAGCCATCCACGCTTTAAAGCATCAGTTGAAGAATGTACTGGAAACAAAGTGGCAACGATGTTGCTTCCTATTTTGGATCGTATATCTGAAACTGAAACAGTAGTTGATCTTAGCGACATATTCATGAGGCTTACTTTCGATATTACTTGTGATTTAGTACTTGGTGTTGACCCTGGTTGCCTTGCCTTTGATTTTCCATTAGTTCCCTTTGCGAAAGGTATGGATACCATCGAACAGGTCCTTCTTTTTAGACATATTGTGCCTACTGTATGGTGGAAATTTCTGAGGTGGCTGCGAATTGGGAAAGAGAAGACACTGATAGAGGCTAAGGAAGAAGTTGATAATTTCATAGTGCTATGTATTCAAAAGAAAAGAGAGAGTATTATTAATGGTAGCTCTGAAAGCAATATAGCAGGACCTACCGATCTATTGACCCCATATATGATTCAGAATGACTCAAATACCAAATTTCTGAGAGATTCATTGCTTGCATTCCTTGCAGCTGGGAAAGATACCACAGGAGCCGCACTTGTATGGTTATTTTGGTTGGTTTGCAATAACAAAAGAGTTGAAAATAAAATACTTGAAGAGTTGAATGGTCTTAAGTCATGTAATAATACCGATAGTAGTGAAATGAGAGTTTTTGAGTCAGAAGAGACTGAAGCAATGGTTTACTTGCATGCAGCTGTATGTGAAGCACTAAGGCTATATCCATCAGTTCCATTTAACCATAAAGTTGCTTTGAAGGCCGATGTGTTACCAAGTGGACATAGAGTTCGAGCTGGAACTAAAATTATATATGGCTTGTACTCTGCAGGCAGAATGGAGAATATATGGGGAGATGACTGTTTAGAGTTTAAACCTGAAAGATGGATTACAGAGGAAGGGACACTGAAGCATGTGCCTTCGTATAAGTTTATTGCATTTCACAGTGGACCGAGGTCTTGTTTGGGTAAGAGTATGGCGTTTTTCCAGCTGAAGCTGGTGGCTGCAGCGATTCTGTATAATTTTAGAGTAGAATTGGTGGAAGGACATGCAGTTGAACCTAAACTTTCGGTTGTTATTCAAGCGAAAAATGGGTTGCTGGTTAAGTTAAAGAAAAGAAACATTAACTAGCCAGTAAATGTAGGTGCATGTTTATAATCCTTTGTCATAGATGATTTATGTTGTTCAGCAGTAAATGGGGTCGTTCACATTTCCATTTGGTTTAAAGTACATATACTCTAGGGTGTCTTTTTAACGTCTGGATTGTAAGATATCATGCATGAAACGGCACGATTTTTACGATATATTGCCAGAGCTTGGGGGAAGTTTAAACATTTCTAATATTTATTGTTACAACATAATAGGAATAAATAAGTTTAGCCCCATTACCCTCCATTAAATTACAGGAAATTATTGTCAATGACAAAATTTCTCAGCATTTTAGCCATAAGGACAGACCTTCAATATGTTTGTCTGAAGGACAACTTTCTATAGGTATTAGTTTTTAGTTATTGATAGCAGTTTTTAGGTATCAGTTTGTAGTTATCGGTAGCAGTTATGATTCAACCTCAAATGTAATATAGTAGAAATACGATACGCGGCAAATTATGATTTGAGGCGAGTATGTATAAGCCCGAGCATGATATATAAACAGAGATAACCATAAATCTTTGGTTGGATAAAATTTGAACATATGACTTCATTAAATATTGTTGTTTGACTTGTAATTTTGTGTTGCAGGTTCTGTATTCTTGAAGGCGTTACAATACACCAGAACAGGCCAAAAAGCCTATATGCCAGCCAAATCTTTAGATCAGAACTGTAACATTAAAGCACGGATAAAACCATGGACATGGTGTGCCATCTACTGATATTCTTTTGAATCATTGTTTTATATTGTATTAATCGCGCTGGATATGTAAATCCTGTGGAGTTATATGTTAATCCAT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256136.1	1.8e-166	alkane hydroxylase MAH1-like
Swissprot	A0A140IL90.1	2.7e-111	Cytochrome P450 96T1
trEMBL	A0A5P1F8B5	1.3e-166	Cytochrome P450

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G23180.1	43.06	7e-123	437	CYP96A1	cytochrome P450, family 96, subfamily A, polypeptide 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G02854	AT2G23180.1	504	267	5	14	501	14	513	43.06	7e-123	437
AfisC6G02854	AT4G39480.1	500	265	4	14	500	17	513	43.80	3e-119	426
AfisC6G02854	AT4G39490.1	485	258	4	33	500	36	516	42.47	4e-118	421

Ortholog group

Species	Genes
Allium cepa	g403785.t1
Allium fistulosum	AfisC6G02854
Allium sativum	Asa8G03930.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	33	490	193.1	6.7e-57

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0006952	P	defense response
GO:0005783	C	endoplasmic reticulum
GO:0055114	P	oxidation-reduction process
GO:0010025	P	wax biosynthetic process
GO:0010345	P	suberin biosynthetic process
GO:0010584	P	pollen exine formation
GO:0016709	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
GO:0018685	F	alkane 1-monooxygenase activity
GO:0035336	P	long-chain fatty-acyl-CoA metabolic process
GO:0042761	P	very long-chain fatty acid biosynthetic process
GO:0048437	P	floral organ development
GO:0048438	P	floral whorl development
GO:0048827	P	phyllome development
GO:0080133	F	midchain alkane hydroxylase activity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network