Gene information

Detail information of AfisC6G02866

Location

Gene	Chr	Start	End	Strand
AfisC6G02866	chr6	499370522	499371385	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020274830.1	7.8e-40	calmodulin-binding receptor-like cytoplasmic kinase 2
Swissprot	Q9FIL7.1	2.6e-24	Calmodulin-binding receptor-like cytoplasmic kinase 1
trEMBL	A0A5P1E842	5.6e-40	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G58940.1	45.78	3e-29	125	CRCK1	calmodulin-binding receptor-like cytoplasmic kinase 1

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G02866	AT5G58940.1	166	68	5	66	209	71	236	45.78	3e-29	125
AfisC6G02866	AT2G11520.1	130	66	2	87	209	184	313	43.85	4e-26	114
AfisC6G02866	AT4G00330.1	168	86	2	48	208	52	209	38.69	3e-25	112

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	128	210	50.0	2.1e-13

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0000166	F	nucleotide binding
GO:0005739	C	mitochondrion
GO:0004683	F	calmodulin-dependent protein kinase activity
GO:0005516	F	calmodulin binding
GO:0030139	C	endocytic vesicle
GO:0007166	P	cell surface receptor signaling pathway
GO:0009409	P	response to cold
GO:0009505	C	plant-type cell wall
GO:0009506	C	plasmodesma
GO:0009556	P	microsporogenesis
GO:0009651	P	response to salt stress
GO:0009737	P	response to abscisic acid
GO:0009742	P	brassinosteroid mediated signaling pathway
GO:0009786	P	regulation of asymmetric cell division
GO:0009793	P	embryo development ending in seed dormancy
GO:0009986	C	cell surface
GO:0010152	P	pollen maturation
GO:0010183	P	pollen tube guidance
GO:0010311	P	lateral root formation
GO:0016310	P	phosphorylation
GO:0019199	F	transmembrane receptor protein kinase activity
GO:0019901	F	protein kinase binding
GO:0033612	F	receptor serine/threonine kinase binding
GO:0042542	P	response to hydrogen peroxide
GO:0042803	F	protein homodimerization activity
GO:0048829	P	root cap development
GO:0090404	C	pollen tube tip

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network