Detail information of AfisC6G02968


Location
GeneChrStartEndStrand
AfisC6G02968chr6520985569520987729-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020251624.15.8e-59uncharacterized protein LOC109828999
SwissprotF4JIJ7.14.7e-21bHLH transcription factor bHLH162
trEMBLA0A5P1FVW74.2e-59BHLH domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G20970.136.222e-23 105basic helix-loop-helix (bHLH) DNA-binding superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag159143.t1
Allium fistulosumAfisC6G02968
Allium sativumAsa8G03881.1
Arabidopsis thalianaAT1G10585.1; AT1G10586.1; AT1G10586.2; AT4G20970.1
Oryza sativaLOC_Os01g01870.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00010.23HLHDomain176725.58.7e-06

Gene Ontology
AccessionOntologyName
GO:0050832Pdefense response to fungus
GO:0005634Cnucleus
GO:0005737Ccytoplasm
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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