Detail information of AfisC6G03114


Location
GeneChrStartEndStrand
AfisC6G03114chr6552742313552743056-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrRZR81312.17.3e-36hypothetical protein BHM03_00007505
SwissprotQ9SB61.14.7e-32Protein MATERNAL EFFECT EMBRYO ARREST 68
trEMBLA0A427B2E41.2e-35ZF-HD dimerization-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G24660.145.031e-36 149ATHB22;HB22;MEE68;ZHD2homeobox protein 22

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag104220.t1; g266396.t1
Allium fistulosumAfisC6G03114
Allium sativumAsa8G03777.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF04770.9ZF-HD_dimerFamily8113080.95.7e-23

Gene Ontology
AccessionOntologyName
GO:0001101Presponse to acid chemical
GO:0003677FDNA binding
GO:0006355Pregulation of transcription, DNA-templated
GO:0009628Presponse to abiotic stimulus
GO:0009725Presponse to hormone
GO:0009793Pembryo development ending in seed dormancy
GO:0033993Presponse to lipid
GO:0042803Fprotein homodimerization activity
GO:1901700Presponse to oxygen-containing compound

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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