Detail information of AfisC6G03153


Location
GeneChrStartEndStrand
AfisC6G03153chr6565551360565559189+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008783898.16.1e-51transcription factor bHLH30-like
SwissprotQ9S7Y1.12.9e-34bHLH transcription factor bHLH030
trEMBLA0A7M3UQH02.1e-61BHLH transcription factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G68810.141.012e-29 125basic helix-loop-helix (bHLH) DNA-binding superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag222124.t1
Allium fistulosumAfisC6G03153
Allium sativumAsa8G03743.1
Arabidopsis thaliana
Oryza sativaLOC_Os08g37290.1; LOC_Os09g28900.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00010.23HLHDomain6511141.01.2e-10

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005739Cmitochondrion
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0009718Panthocyanin-containing compound biosynthetic process
GO:0010200Presponse to chitin
GO:0016036Pcellular response to phosphate starvation
GO:0080147Proot hair cell development

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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