result

Gene information

Detail information of AfisC6G03473

Location

Gene	Chr	Start	End	Strand
AfisC6G03473	chr6	630452488	630457640	-

Sequences

CDS

>AfisC6G03473
ATGGAGAGCATAAACTTCTCCCGTGATCTTGATCACAACATACCAAAATCAGTTTCTGGAAATTACCAAAACACCCTTGATAAAGACGAGATGGATGCATCAGAACCAGGGAGGTGCATGTGGCAAGAAGAACAGACGAGGAATAGCAGGGAACAGGCTCGGAGAAAGAAGATGTCACGTGCACATGACGGAATCCTGAAATACATGCTGAAGATGATGGAGGAGTGCAATGCTCAGGGCTTCGTCTACGGATTCATACCCGAGAACGGGAAACCTGTTACTGGGTCCTCCGACAACCTCCGCCAATGGTGGAAAGACGAGGTCCGTTTCGATCGTAATGGACCTGTTGCACTCTCCCAATACAAACTCCAGAATGGCATACATGACCCACATGATGAATCGGGTTCCGGGCCTATTGGCCCGAATTCACTTATGGAGCTCCAAGACACGACCCTAGGGTCGCTTCTGTCTGCTTTGATGCAGCATTGTGACCCTCCGCAAAGGCGCTGCCCTTTGGAGAAGGGGGTACCGCCTCCATGGTGGCCTACCGGGCAAGAAGAGTGGTTCTTGAAAGCTGGGTTATTTAGAGATCAACAGCAACAGCAACAGCAGAATGTTCCTTATAGGAAGCCGCATGACCTTAAGAAGGCTTGGAAGGTAGGAGTTCTGATAGCTGTTATTAAGCACATGGCTCCGGATGTGGAGAAGATACGAAGGCTTGTGAGACAGTCGAAAGGTTTGCAAGATAGAATGACTGCTAGGGAAAGTGAGATTTGGCTTGCTCTGCTGAAACACGAAGAAGAGCTTTTTGCAAAGGGTAATGCGAACGTTTACCTTGCTTCAAAACCTACGTGCTCGAGGTTCGAGGGAAACGAGAATGATATGAAAAGGGAAGACAATGAGGTGGAGTTTATAAATAAAAGAGGGGCGGTCGAGGAGATGAGTGTGGAGATGAATCAATGCGTTTACAGTTGTCAGAGTTCGGGTTGTGCTCTTGGGTTTCTTGATAGGAGTGGCAGGAACAATCATCAGTTACAGTGTGAGTATAGGAACAAGATGGAAGTTTTCAAGGTGAATGAAAAGAAGCCTGTGATTTTCTGGGATATGGGGACTCCGGTAGATGGTCGGAAGGAGATTGATGAACTGGTGAGCTTATATGATAAGAATAGTGGTTTTGGTCGAGATAGTGATTTGTTTGATGTGGTGAACAACAGTTTAGCACAACGTCGGTGTTTTACCTATAGTGGAGATGCATCGTCAGTTAATGGGCATACGGGTAATGACTTTGGGCTCGGGTCTCCTTTCAGTATGAGTAATAATATGGATTCTCTGGAAACGAGTCCCAATTGTTTTGGGTGGTTCGTTTAA

Protein

Gene

>AfisC6G03473
GTTATTTTTACTTCTTCAGCCAAATTGTTTCTCACTCTACAAAAGAATAATAATTTCATTTAATTTTTATATCGTCTTATCATCTCTTTTCCTTGTAATTTGCTTGAAGACTTGTTAATGGCTTGGAGCAAGAGGAATCCAGTAAAAAAAGGTTCGATATTTTGGCTGTTACTTTTAGTTTACTTATTTATTTTTTGTTGTTGGATGCTTGTATTTTTGTAATCAGTGATATGGTTTTTTTACTAAGGGTAGTTTCCCATTCATTATGTGTACGTTTTTATTTTGTTGGGATATGATTATAATATTGAACACCTACAATATGTATAGCTAAAAATCTCTTCTTATTCATTTTAATGAAATGGGTTTAATTGTTGTAAAATTGCTAATGGTTTTTAGATTGAAGAATCCATTAATATGATGAGCTTGTTTCCATTGAAATTATCTTTTAAGCATCTCCAGCAGGAGCCGCAGGAGTGATTGTTGAAAAATGGACTCCCAACTTTTTTTTGACTCATCACGCTTCGGCTGCGTCGAACGCGGAGAGAAGCAAAAATGGGAGTTTCTTCTATTTTACTCTTTCAGCCTGGATGCGTAAAGGGGTTTTTGAAAATCGTTTATTCTTTAAAACCGTTTAAGGGAAAAATAAAGTTTCTAAAACCCATATAATCCTTTAAACGGCTTTCGAACCTTGTTGATAGATTTTTTTTAATGACAATTCCTTTTACTCGCTGCTGAAAGAGTAGAAAGAAGTGGAACGAATCACTTTCCATTTCTTTCTCCTTCTGAAAATCGCCACCATCTTGGAGATGCTCAGTGATGATAATGAAATAAAAAGTTATATTACAGTTCTTGGACTTAGTATTGATTTCAAAATTTACAGTAGAGTTTTGTAACAGGTAAGCTTTGTAGGGAGCTGCCTTGGAATCCATCCTTTAATTGATGTATTATTCTATTTTTACCCTATTTTAAACTATTATTTAAATGCTTCAACTTTTACAATATATTTATAATTTCATATTTTCTATTTTTTTTAAGAAAAAATCTTTCAAAAGATATATTATTATGAGAGATTTAGGGAGAAGGACAAACTTTGAAAAAAAAACTAGACTGAATGCCAACAAGTTTCATTTTTGAGTTGAAGAAAAACAAGTTTCATTTTTGGACCGAAGGACAAACATTAAAAAAAATTAGGTTGAGGAAGAATGTTAGTTATAACTAGCATTATATTCAGTTTTTACACTACACAAAACACTAGTTATAACTAGCATTATATTCAGTTTTACACTGTACAAAATGCTAGTTATAACTAGCATTATATTCAGTTTTACACTGTATAAAATGCTAACTATAATTAGCATTGTCCTTCAGTCTAATTTTTTTCAAAGTTTGTCCATCAATCCAAAAATGAAACTTGTTGTCCTTCAACCTAATTTTTTTTCAAAGTCTATCATTGTGCCTATTTTCCACTTTTATTATATTAGTGACACGTTTGTGTTTTTTTCTTTCGAATAAAGGCTGGAAAATTGTTTATTTAACAAAATTTGAATATTACTTATGTCTTTTAATTTCTATATTTTATCTTGTGGAAAATAGGCACAAGAACAAACTTTGAAAAAAATTTAGACAGATAACAAGTTTCATTTTTGAGCTCATAATTAACGTTGTCCTTCAGCCTAAATTTTTTCAAAGTTTGTCCTTCAATCCAAAAATGAAATTTGTTGTTCCTCAGCCTAATTTTTTTTCAAAGTTTGTCATTTTGTCTATTTTCCACTATTATTATATTAATGACACGTTTGTGGTTTTTTCTTTCGAATAAAGGTTGGACAATTGTTTATTTAACAAAATTTGAATATTACTTATTTCAGTCTTTTAATTTCTATATTTTATCTTGTGGAAAATAAGCACAATGACAAATTTTGAAAAAAAATTAGACGGACAACAAGTTACATTTCTGAGCTCAAGGACAAACTTTGAAAAAAAAAATTAGACTGCAGGACAATGATAATTATAGCTAGCATTTTGTCCAGTGTAAAACTGAATATAATGCTAGTTTATAACTAGCATTTTGTATAGTGTAAAAACTGAATATAATGCCAGTTATAACTAGTATTGTCCTTCAGCCTAATTTTGTTCTTCAAAGTTTGTCCTTCAGCTTAAAAATGAAACTTGGTGTCGTTCAACCTAATTTTTTTTCAAAGTTTATCATTTTCCCTAATTCCCTCTGAATTATCATTGTTTAATTGGATATTTTTTTGAAATATAGCTTATTATGGTTTTATGATACAACATTTAAAATTTAAGGGTTTGTTTCTTTTCAAAACACGTGTTTTGAGTTTTGCATTTTCGATATGTACTTCAAATGCCTGAGAAAATGTTTGAGAGATAAAAACCGTAGAAATCCTAATGGTGTTATCCCAAAGCGGAAAAGAAAAAAAGGTTGTTTTTCATTTTGTCCGCTAATACCATATTTCTAATTGGTCGTTTTTCCACTCTTCTCATATTTCTTGTATTTTTACATATATGGTTGAAAACGGAAATCACAAAACTCATTTCTCAACCAAACAGACCATGACATTTTAATTTCAAAACAAAATTTAATAATTACTTTTTGTATAATATATATTTTCTTTAGATATATCAGTAGTCATGCATGTGTAAATAAAAAAAAATCATCATATTTTTATGGAAGTTTTTGGCAAAAAAGTGGTAAAATTGTTAGCAACGTAGTTCTAGTGTCAAATCGTCTAAACCACTACTTATTTAGTATGGAGATATTCTCGTTATACATAGATATACCTAATTTCATAAGTTTAGAATGGTTCTCATAACTAAAGAAAACAAACTTAAGCATGGTTTATATTTTACAAAACCTATCATTAAATCATCTCAAAACCAAACAAGACGATCAAACCGGTTACGTCTAAAATCTCTCATAATGACGCAACAAAACTCCCAAGTATAGCCTAAAGCTACAGTTCTTTTTCAAATTTCCATTCTAGTTAGCATAAATAATTAACTAGATTTTTACTGCAAAATTTGCTTTTATTAAGAGCAATTTAAAATACATATAAAAAAAAAATATTAGCTCACAAGGTTGTTCTTCTCTCATGAAAAATCCTCTAACTAGTGCATGTAATTAGTTGTTATCAATAGAACCACTAAATGCTTAGTTAGTTAGTTGTTGACAATAGATTTGAGATATTAAGTTTGGTTAGATTAGGTTATCCAATTCACTGATTTGAAACGTTCTCACAATAGAATTGTTTCGATCATAATTTAGATATGAAAAAAATATCTGCCCTTTTTATAATGCAGGTTTGTAGATCTTTAATTGTCGCATAATATCTTGCTCTATATGTTTGTGCTACTGATATAGAGGCATATAAAGGGACCTTTATACATGTCTATAATCTATGGCCAGTAATTGTACAGATACTTACATGTTAGGTTGATTCTTAGTATCTCTTGCGTGCAACTGTTCAAAATATCTAAAGAAGATATCCAATAGAAAATATCTTGCCTTTATATTGCAGGCATTCATTCAAAACGTTGGCTGGATCAACCATGGAGAGCATAAACTTCTCCCGTGATCTTGATCACAACATACCAAAATCAGTTTCTGGAAATTACCAAAACACCCTTGATAAAGACGAGATGGATGCATCAGAACCAGGGAGGTGCATGTGGCAAGAAGAACAGACGAGGAATAGCAGGGAACAGGCTCGGAGAAAGAAGATGTCACGTGCACATGACGGAATCCTGAAATACATGCTGAAGATGATGGAGGAGTGCAATGCTCAGGGCTTCGTCTACGGATTCATACCCGAGAACGGGAAACCTGTTACTGGGTCCTCCGACAACCTCCGCCAATGGTGGAAAGACGAGGTCCGTTTCGATCGTAATGGACCTGTTGCACTCTCCCAATACAAACTCCAGAATGGCATACATGACCCACATGATGAATCGGGTTCCGGGCCTATTGGCCCGAATTCACTTATGGAGCTCCAAGACACGACCCTAGGGTCGCTTCTGTCTGCTTTGATGCAGCATTGTGACCCTCCGCAAAGGCGCTGCCCTTTGGAGAAGGGGGTACCGCCTCCATGGTGGCCTACCGGGCAAGAAGAGTGGTTCTTGAAAGCTGGGTTATTTAGAGATCAACAGCAACAGCAACAGCAGAATGTTCCTTATAGGAAGCCGCATGACCTTAAGAAGGCTTGGAAGGTAGGAGTTCTGATAGCTGTTATTAAGCACATGGCTCCGGATGTGGAGAAGATACGAAGGCTTGTGAGACAGTCGAAAGGTTTGCAAGATAGAATGACTGCTAGGGAAAGTGAGATTTGGCTTGCTCTGCTGAAACACGAAGAAGAGCTTTTTGCAAAGGGTAATGCGAACGTTTACCTTGCTTCAAAACCTACGTGCTCGAGGTTCGAGGGAAACGAGAATGATATGAAAAGGGAAGACAATGAGGTGGAGTTTATAAATAAAAGAGGGGCGGTCGAGGAGATGAGTGTGGAGATGAATCAATGCGTTTACAGTTGTCAGAGTTCGGGTTGTGCTCTTGGGTTTCTTGATAGGAGTGGCAGGAACAATCATCAGTTACAGTGTGAGTATAGGAACAAGATGGAAGTTTTCAAGGTGAATGAAAAGAAGCCTGTGATTTTCTGGGATATGGGGACTCCGGTAGATGGTCGGAAGGAGATTGATGAACTGGTGAGCTTATATGATAAGAATAGTGGTTTTGGTCGAGATAGTGATTTGTTTGATGTGGTGAACAACAGTTTAGCACAACGTCGGTGTTTTACCTATAGTGGAGATGCATCGTCAGTTAATGGGCATACGGGTAATGACTTTGGGCTCGGGTCTCCTTTCAGTATGAGTAATAATATGGATTCTCTGGAAACGAGTCCCAATTGTTTTGGGTGGTTCGTTTAATGCATGGAGTCCACTGAACATTTATGTACAACTGTGTTTAGTTATAGCTTCTTTTCTTTTTTGTTTATTTGTCTTCGGAGTATAGTCCGAAAACGTAGGGGCTGTTGTTAAAACTTGGAAACGTATGGTAACCAAAAACTTCATTGTGTGTTCGATATGTTTATGACAACTGGCTAGAAAAGCAAGTCAAAGTTTTAGTATTATGTTTTTTATGAGATTGT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_009145591.2	4.4e-103	protein ETHYLENE INSENSITIVE 3
Swissprot	O24606.1	6.5e-104	Protein ETHYLENE INSENSITIVE 3
trEMBL	A0A816TR04	3.1e-103	(rape) hypothetical protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G20770.1	47.13	2e-106	382	AtEIN3;EIN3	Ethylene insensitive 3 family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G03473	AT3G20770.1	471	151	11	29	408	44	507	47.13	2e-106	382
AfisC6G03473	AT2G27050.1	456	142	13	29	389	44	489	45.83	1e-96	350
AfisC6G03473	AT1G73730.1	298	94	6	29	297	33	312	52.68	2e-80	296

Ortholog group

Species	Genes
Allium cepa	g334852.t1
Allium fistulosum	AfisC6G03473
Allium sativum	Asa8G03500.1
Arabidopsis thaliana	AT5G10120.1
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF04873.10	EIN3	Family	37	267	362.2	1.1e-108

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0000976	F	transcription regulatory region sequence-specific DNA binding
GO:0001666	P	response to hypoxia
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0042742	P	defense response to bacterium
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0009873	P	ethylene-activated signaling pathway
GO:0010182	P	sugar mediated signaling pathway
GO:0042762	P	regulation of sulfur metabolic process
GO:0071281	P	cellular response to iron ion
GO:0080167	P	response to karrikin

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14514	EIN3; ethylene-insensitive protein 3	EC:-	MAPK signaling pathway - plant	ko04016
K14514	EIN3; ethylene-insensitive protein 3	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network