result

Gene information

Detail information of AfisC6G03642

Location

Gene	Chr	Start	End	Strand
AfisC6G03642	chr6	662107105	662109948	+

Sequences

CDS

>AfisC6G03642
ATGGTTTTAGCTACGGTTACGGGAACTGAGGTGATTCAAGGTTTTTCTATGCTCGATGTAAAGAATAGAACAGTTTCGAAAGGGATAGAGGAGATCATCGACGTTACTTTGGTGGCGTCGACTCCGTTTTCGCCAGTGGATGAACACGAGGAAGATACGATTCCTGAGCTGGACTTGGGAGACTCGGTTACCACATCAGATACAGAACCTGAAGTTCTTCCATTTGTTCCTACTATTCGATCTGGTAGTTTTGCAGACATCGGGCCTCGTCGCTATATGGAAGATGAACACATATGCATTGATGATCTATCCTCTCACATGGGCTCTCTTTTTACATTTCCCACCCCCAGCGCCTTCTATGGGGTTTTTGATGGTCATGGAGGTCCGGATGCTGCAGCTTATGTTAAAAGACATGCCATGAGATTCTTCTTTGAGGAATCTGTTTTCCCACAAGCATCTGATGCAGATAATGTATTTATAGAGTCTGTTGAGTGCTCTGTTCGAAAAGCATTTTCCCTTGCTGATCATGCTTTAGCTGATGATCGCACCATTAGCAGTTCTTCTGGTACAACGGCACTTGCGGCTTGGGTTTTCGGAAGGCTTCTACTGGTAGCAAACGCAGGAGACTGTAGGGCGGTCCTATGCCGCAAAGGGGAAGCAATCAACATATCCCACGACCACCGTCCAATCTATCCCAGTGAGCGTCACCGCATAGAATCATCTGGAGGTTACATAGATGATGGCTACCTAAATGGTGTCCTATCCGTAAGCCGTGCCCTAGGGGACTGGGACATGAAGCTTCCACGCGGGTCCTCTTCACCACTAATATCCGAACCCGAATTCACCCAAACCTTCCTGACAGAAGAGGATGAGTTCCTGATAATCGGGTGCGACGGAATATGGGATGTAATGTCCAGTCAGCATGCAGTCAGCATCGTCAGAAGGGGACTTAGAAGGCATGACAATCCAGAACAGTGTGCCAGAGAGTTGGTCAGGGAAGCCCTGCGGTTGAACACCTTTGATAACTTGACTGTTATCGTCGTTTGTTTTACGAGGGACATCAGAGATGAGAGGAAGGAGAAGGAGGTTAAGTTGCGTTGCTGTAGCTTGTCTGCCGAGGCCTTGTGTAATTTGAAGAGCTGGTTGGACAATTAG

Protein

Gene

>AfisC6G03642
CGCCTTTCTTTCAGATTCGCGATTTTTCCAAACAACCCTGATACTAATCATAATTTACAAAACAATCTTTCAAACCCTAACAAACAAGTCAATCCCAAATTCATTTCACCCCCAATTCTACATATTACAACTCATCAAATCCACATCTTTTTGAAGGATTTCGCACTAGCTGCGTTTTTTCATCGATCGACGCCATCTAATCATGGTTTTAGCTACGGTTACGGGAACTGAGGTGATTCAAGGTTTTTCTATGCTCGATGTAAAGAATAGAACAGTTTCGAAAGGGATAGAGGAGATCATCGACGTTACTTTGGTGGCGTCGACTCCGTTTTCGCCAGTGGATGAACACGAGGAAGATACGATTCCTGAGCTGGTGAGCAGACGTTTTTCTTATTTGGAAATATCGATTGACGTTTTATGTAAATTACGAGAATCGCGAGTTATTAATCTGAGTCATTAATGTGATCGTACTATGAAGAATAGTGCCAGAATTGAAAGTAGGCTATATTTCGTACTTGTTTGGATTTGGTCATAAAATTGGCTAGTAGTTATATCTCCTTATTTTCCCCAATAAAACGTCTATAAGAAACGATAAGTTGTTGAGCAAATACTAGTTCATGCTAAAGCAACATTTTAATATTTCTATAATAAAGAAATTCATTTGATATATCTGTGATACCCACGACTTTCCGATTCTTTAACCAACCTTGTTGATCCACAGCATTGAATTAGCAGATTTATTTGCACTGATCATCGTAAACTATAGATCTTTGAAACTGTTAAGTGAAGTTGTGATTGATTAGTTTAATGGCAACAATAGATCCATTAAATTACTTGCTTCCTTCAATCTTAGATACTGTTGGTTATTTGGTAATCTAAAGTTGCGGTAGTCTTATACACATCCTTAAAATTTTGTTTTGCATTTACAGGACTTGGGAGACTCGGTTACCACATCAGATACAGAACCTGAAGTTCTTCCATTTGTTCCTACTATTCGATCTGGTAGTTTTGCAGACATCGGGCCTCGTCGCTATATGGAAGATGAACACATATGCATTGATGATCTATCCTCTCACATGGGCTCTCTTTTTACATTTCCCACCCCCAGCGCCTTCTATGGGGTAAGTATATAACAGTTGCTTAATACCGAAATATGCTTATTAAGTAAAGAGTGTTTATAATTAAATCAATGCCTGGTGCATTTTTCTATAAATAGGTTTTTGATGGTCATGGAGGTCCGGATGCTGCAGCTTATGTTAAAAGACATGCCATGAGATTCTTCTTTGAGGAATCTGTTTTCCCACAAGCATCTGATGCAGATAATGTATTTATAGAGTCTGTTGAGTGCTCTGTTCGAAAAGCATTTTCCCTTGCTGATCATGCTTTAGCTGATGATCGCACCATTAGCAGTTCTTCTGGTACAACGGCACTTGCGGCTTGGGTTTTCGGAAGGTATGTTTAGAATATGTTTTATACACATGTTTTTCATATTGAATATCATTTGGTTACATACTGGTAGCAATCATAAAGCGAAGTCTATTGTTCCGGTAACTCACTTCGCTTTCCATTTGAAGATGTAGATGTATGGGAATTGTTTAGTCTAGTTCTAGCATCTTCAAAACTACATATTAAACCGAATATAGCTTTAAGTTTCCAGGTTGTAGCAACATAGCCGGTACTAACAATTTTTAGGCTTCTTGCACAAAATATAAATAATTGGATCTCTTTTTATATGTACACTTCATAATGTAGTATGAATATTCATGGTAATCAACATTCTCCACATAGTTTATTCGCAATACTCAAGAAAATCAATGAAAATGGGAATGATGATTGGCAATCGGTCATTTGTAACATTTAATACTTAAATACTCTCTGGTTTTCCACAGAAGGTATTAATGAGGTGGCAATTTTTTTTCTTTTTTTCTTGATAAAAAAAAACATGCATAGCATATTCAAATGTATAATATCATACATATACATTACAGGCTTCTACTGGTAGCAAACGCAGGAGACTGTAGGGCGGTCCTATGCCGCAAAGGGGAAGCAATCAACATATCCCACGACCACCGTCCAATCTATCCCAGTGAGCGTCACCGCATAGAATCATCTGGAGGTTACATAGATGATGGCTACCTAAATGGTGTCCTATCCGTAAGCCGTGCCCTAGGGGACTGGGACATGAAGCTTCCACGCGGGTCCTCTTCACCACTAATATCCGAACCCGAATTCACCCAAACCTTCCTGACAGAAGAGGATGAGTTCCTGATAATCGGGTGCGACGGAATATGGGATGTAATGTCCAGTCAGCATGCAGTCAGCATCGTCAGAAGGGGACTTAGAAGGCATGACAATCCAGAACAGTGTGCCAGAGAGTTGGTCAGGGAAGCCCTGCGGTTGAACACCTTTGATAACTTGACTGTTATCGTCGTTTGTTTTACGAGGGACATCAGAGATGAGAGGAAGGAGAAGGAGGTTAAGTTGCGTTGCTGTAGCTTGTCTGCCGAGGCCTTGTGTAATTTGAAGAGCTGGTTGGACAATTAGGGTTTGTCGTTTTGGGTTTATTATCTGTGTAATAATAATTTATACAACATTTTTATTGTACAATTGGGGATATGTTTTTAAGGTAATTCTGGGTGTTGCCTAGCAGTTTTGATGGGTCTGATGTTGTTGAGAGAGCTTTGTATGATGTATGTACATATAGGGAGGATGGGTTGAGGAATTGGTGTACTATCATTGGTGTTGTTACTTGCTGTTCATTCTTGTTCATGTTTCCTTCCTTTCCTTCTTCCATTACTGCATTATCCACCTTGTCATTTTGCTCGTTGTTCATGTAGTTTTGTT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020275006.1	2.1e-159	probable protein phosphatase 2C 47
Swissprot	Q6AUQ4.1	6.5e-129	Probable protein phosphatase 2C 47
trEMBL	A0A5P1EE66	9.3e-157	protein-serine/threonine phosphatase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G62260.1	65.44	7e-122	434		Protein phosphatase 2C family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G03642	AT3G62260.1	327	111	2	59	383	56	382	65.44	7e-122	434
AfisC6G03642	AT3G62260.2	319	104	2	67	383	65	383	66.77	7e-122	434
AfisC6G03642	AT1G48040.1	330	134	4	55	382	53	380	58.18	1e-105	380

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00481.18	PP2C	Family	90	342	211.2	1.8e-62

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0016020	C	membrane
GO:0005739	C	mitochondrion
GO:0005829	C	cytosol
GO:0004722	F	protein serine/threonine phosphatase activity
GO:0016055	P	Wnt signaling pathway
GO:0046872	F	metal ion binding
GO:0005634	C	nucleus
GO:0006470	P	protein dephosphorylation
GO:0009414	P	response to water deprivation
GO:0009737	P	response to abscisic acid
GO:0009967	P	positive regulation of signal transduction
GO:0033157	P	regulation of intracellular protein transport
GO:0043124	P	negative regulation of I-kappaB kinase/NF-kappaB signaling
GO:0046822	P	regulation of nucleocytoplasmic transport
GO:0050688	P	regulation of defense response to virus
GO:0061416	P	regulation of transcription from RNA polymerase II promoter in response to salt stress
GO:0071560	P	cellular response to transforming growth factor beta stimulus
GO:0090101	P	negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway
GO:0090288	P	negative regulation of cellular response to growth factor stimulus

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14803	PTC2_3; protein phosphatase PTC2/3	EC:3.1.3.16	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network