result

Gene information

Detail information of AfisC6G03696

Location

Gene	Chr	Start	End	Strand
AfisC6G03696	chr6	669042818	669043592	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010909436.1	1.2e-47	auxin-responsive protein IAA4 isoform X1
Swissprot	A2WNM0.1	9.5e-37	Auxin-responsive protein IAA4
trEMBL	A0A6I9QH85	8.9e-48	Auxin-responsive protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G17600.1	50.37	6e-34	139	IAA31	indole-3-acetic acid inducible 31

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Ortholog group

Species	Genes
Allium cepa	g197252.t1
Allium fistulosum	AfisC6G03696
Allium sativum	Asa8G03337.1
Arabidopsis thaliana	AT3G17600.1
Oryza sativa	LOC_Os01g18360.1; LOC_Os01g18360.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02309.13	AUX_IAA	Family	67	161	105.6	3.3e-30

Gene Ontology

Accession	Ontology	Name
GO:0005634	C	nucleus
GO:0006417	P	regulation of translation
GO:0046983	F	protein dimerization activity
GO:0009536	C	plastid
GO:0009630	P	gravitropism
GO:0009733	P	response to auxin
GO:0010262	P	somatic embryogenesis
GO:0044212	F	transcription regulatory region DNA binding
GO:0048364	P	root development

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14484	IAA; auxin-responsive protein IAA	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network