result

Gene information

Detail information of AfisC6G03701

Location

Gene	Chr	Start	End	Strand
AfisC6G03701	chr6	670367395	670369174	+

Sequences

CDS

Protein

Gene

>AfisC6G03701
ATAAAATATAAAAAGTTGTAACCCCACCATTTCTACAGCAGACTTTAATTCTGAGGAGTGATTAGACAGAAGAAAACAATGATTTATCTTCAATCCTACCTCATCATCTCCTTTAAAAAGAAGCTCAATCAATAATAAAGGATGAGAAGGAGAAGAAGAATGAATCAATAGACAGGAAAAAAAGGAAACCTCAAATCACAACCACTTGATTGTGACATCCTATTCTTAGTTCATACTCTTCTTCATTTTATAGCAGCTTAACATTTCTTGATACTAAAAAAGTCAGTAAAAGGAGTGAATACTAAATTATGGGCAGACATTCCTGTTGCTACAAGCAAAAGCTAAAGAAAGGACTTTGGTCACCTGAAGAAGATGAAAAGCTGTTGAATCATATCACTAAATATGGCCATGGATGCTGGAGTTCAGTTCCAAAACAAGCAGGTACCCTTTTTTCGTAAATAATAATAAATAACATATAACAGTGCAAGACATGAATTTGCAAGTTTTGGAAATTCTACATACACCTGGTTAATTCTGTAAACCAAATGGAGAATGTGTTTTGCCTCCTTTATAATAAGTTTCTACAATTTCTGTCATGAATTATAATGTTTATTCAGGTCTACAAAGGTGTGGTAAGAGTTGCAGATTAAGATGGATAAATTATTTGAGGCCTGACCTTAAAAGAGGTACATTTTCGCAGCAAGAAGAGGATCTCATTGTGGAACTCCATTCTGTACTAGGCAACAGGTAATTTGTACTCTGAAAACAAATTAAAAACACATTAAAATAGTTAGTTCATATCATGAATTCAGTAAGACTGACATTGAATGGATGTTCAGGTGGTCACAGATTGCAGCACAATTGCCAGGAAGAACGGATAATGAGATAAAAAATTTATGGAATTCTTGTATCAAGAAGAAGCTAAGGCAGAGAGGTATCGACCCAAATACGCACAAACCAATAACTGAGAGTGAACTAGAAATTGAAGAAGAGAAAGCTGCAGCAAATAGTAACAAGTCTTCAAGCTCAAGTGAACTTAAACAGATTGCTCCACAGTTGAATTCTGATCAGTTTATGAGGTTCAACCAAAACATGAATATTGAGTTTGATACTACTAATGTGGTCTCTACTTCAGTTCCATCAATTCCATATTGGAGCAATTCAGTAAATGGTATGCAGTATTGGGAAGCTGGAAATACTAGTAATTATTCATCATGGAATAATGATATTGCACAAGATAAAAGCTCTCAATTACATTTTGATGAAGATTTGAATGAGCTAAAATGGTGTGAATATCTTAATGGTGCATATCCAATATCTGCTGCTCTTCAGAATGATACATATTCTACGGTTGGCGATATCAAATGCGAGAATCAATTTGGCTTTGAAAATTATACTTCTTGGCAAGCAAAATAATCATCACTCAAGGGTATAGTTCTGGCCCTTGCAATGGTAAAGAATGTAAGAGATTTTCTGCAGTATTTGAACAAACTTAGTTTGTCCAAAAACAAAACACCGATAAGAAAACATACAGATTTTTTATTTGGAAAATTTGAGTTGAGCAATAATGTTTTTTTTTCTTCCTCTAAATTGTGTGCTTTTGTTCACAACTTTTCATGAGATTTGTGTAAATAGAATTGATGGTTTATTTTGGAAGTTAATTTGTGTCGAATAAGTAATCGAAGATTGAAGAAAAGCCCACTTGTTGCTCTAGAAAATGATAGTGCATTAAAAAGCGTTGTTCGTTTGCTCTTTTGCACCATATTATGTCCAGGGCTCC

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020272342.1	8.9e-91	transcription factor MYB86-like
Swissprot	Q8VZQ2.1	2.6e-71	Myb-related protein 61
trEMBL	A0A5P1EB82	6.4e-91	Transcription factor MYB61-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G09540.1	49.08	7e-73	270	ATMYB61;MYB61	myb domain protein 61

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G03701	AT1G09540.1	326	107	8	1	268	1	325	49.08	7e-73	270
AfisC6G03701	AT4G01680.1	139	20	0	1	139	1	139	85.61	2e-70	262
AfisC6G03701	AT4G01680.3	133	14	0	1	133	1	133	89.47	6e-70	260

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00249.28	Myb_DNA-binding	Domain	14	61	56.6	1.9e-15
PF00249.28	Myb_DNA-binding	Domain	67	110	48.6	6e-13

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0000981	F	RNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0001135	F	transcription factor activity, RNA polymerase II transcription factor recruiting
GO:0001944	P	vasculature development
GO:0003682	F	chromatin binding
GO:0005634	C	nucleus
GO:0006357	P	regulation of transcription from RNA polymerase II promoter
GO:0009555	P	pollen development
GO:0009611	P	response to wounding
GO:0009651	P	response to salt stress
GO:0009723	P	response to ethylene
GO:0009733	P	response to auxin
GO:0009737	P	response to abscisic acid
GO:0009739	P	response to gibberellin
GO:0009751	P	response to salicylic acid
GO:0009753	P	response to jasmonic acid
GO:0009800	P	cinnamic acid biosynthetic process
GO:0009901	P	anther dehiscence
GO:0009909	P	regulation of flower development
GO:0010089	P	xylem development
GO:0010090	P	trichome morphogenesis
GO:0010119	P	regulation of stomatal movement
GO:0010214	P	seed coat development
GO:0010224	P	response to UV-B
GO:0044212	F	transcription regulatory region DNA binding
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0046686	P	response to cadmium ion
GO:0043565	F	sequence-specific DNA binding
GO:0048364	P	root development
GO:0048658	P	anther wall tapetum development
GO:1900384	P	regulation of flavonol biosynthetic process
GO:1903086	P	negative regulation of sinapate ester biosynthetic process
GO:2000652	P	regulation of secondary cell wall biogenesis

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09422	MYBP; transcription factor MYB, plant	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network