Detail information of AfisC6G03994


Location
GeneChrStartEndStrand
AfisC6G03994chr6714853297714853629-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010935409.27.8e-14HMG1/2-like protein
SwissprotP40619.15.4e-12HMG1/2-like protein
trEMBLA0A8K0N7V71.1e-14HMG box domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G20696.150.828e-2091.7HMGB3;NFD03;NFD3high mobility group B3

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00505.16HMG_boxDomain319431.71.3e-07

Gene Ontology
AccessionOntologyName
GO:0000785Cchromatin
GO:0003677FDNA binding
GO:0003682Fchromatin binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006333Pchromatin assembly or disassembly
GO:0005634Cnucleus
GO:0005737Ccytoplasm
GO:0030527Fstructural constituent of chromatin

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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