Detail information of AfisC6G04004


Location
GeneChrStartEndStrand
AfisC6G04004chr6717612836717618386-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020264290.15.4e-54myb family transcription factor PHL7-like isoform X1
SwissprotQ9SJW0.14.9e-36Protein PHR1-LIKE 7
trEMBLA0A5P1EYR53.9e-54HTH myb-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G01060.155.982e-66 249myb-like HTH transcriptional regulator family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain5410537.32e-09
PF14379.3Myb_CC_LHEQLEFamily13818585.31.5e-24

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0000719Pphotoreactive repair
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0003913FDNA photolyase activity
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0007623Pcircadian rhythm
GO:0009536Cplastid
GO:0009567Pdouble fertilization forming a zygote and endosperm
GO:0009650PUV protection
GO:0010628Ppositive regulation of gene expression
GO:0016036Pcellular response to phosphate starvation
GO:0043565Fsequence-specific DNA binding
GO:0055063Psulfate ion homeostasis
GO:0071486Pcellular response to high light intensity

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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