result

Gene information

Detail information of AfisC6G04029

Location

Gene	Chr	Start	End	Strand
AfisC6G04029	chr6	721874205	721876030	-

Sequences

CDS

Protein

Gene

>AfisC6G04029
ATGGGCCAGACTGCTGATTCCTGTGCATCTCTTATTGCTCTTGGTGTTGTAGACATTGAATACAAGAGGTGAAAATGCATTGTTTACAAGAACATGAATGTTTCTTAGTAGCATTTACAATCATAAAGTTTCAAGATATATACTTCTATTAGTTTTATAGACTTGGAATACAAAAGATGATATTTGCATTACTATGCACCTGTTTTCTTCTAATAAAACATTGATCATCTATTATCCATGTTGATTGCTGCACCTTAGTCTTTTTGGTATTTAAGAGAAGTTCAAAAGGTGCACCAAATTATTTAACTAATAAATATTCAATCTAGATGTCCAGATCTTTTAGTGAAACAAATTTCGAATGCACATACACAATACTGCAAATATGTCTGATATTAATCATGTGTTTCTTAGAGTTTCTTGCAACTACCCGAACAAAAATATCATTTTCAAGATTGACGAAAGCAGCAACTTTCCAAACTACTTGGCCTTTCAGATATGGTTTCAACAAGGAAACCAGGACATAACCGCAGTCCAAGTATGCGAGGTATTTAATATGCAAACATTTCGATTTTTGTTTAAAAATAATTGGTAATTGATGTCTATGAAAATTAAAAACTTGTTTAAAAATGTAATTTGCATACACGTGCATGCAAACGGAGAATTTGACATGCAAGCTAATATGATGGTTGTCATTCATGTTATTGGAAGTTATCAGGTAATTCAAATGGTTTAAGTTCATGATCGAAAGAAATTAATATCTTCCGCTTTTAAGTTGAATCTTCTTTTCCCTAACTAAGTTTACATGTGGCAGTCCGCCTTCCATGACCTTTTAGGGAAGGGGATCTTTAACTCAGATGGTGAAACCTGGCTCCTGCAGAGGAAAACTGCAACTTTGGAATTCACTACGAGGACTTTATGGCAGACAATGGCTAGGTGGGCTAATAAGGCGATTAAGAATCGACTATGGAGAATTTTGGGGGATCACTGTGAGAAGGTTGGAAGTGGTGCAGGAGTTGACTTGCAGGTAATGTAATACCACAATGACCTGTTTTTTTTTCATTTCTCCTTGTACATGCTTGGACATAATATGAAATGGTAACTTTAGTAAAACACTCGCTTTAAGTTTCAAAATGCACCACCATCATTTACCAAAAACAAATTTGAAAAACAGTTTTATTTTTTACTTTCAGCCAAACTAAAAATATTTGAAGTTTCTAAAAATGCAACCGCAAATATTTACACTTTTCAAAATGCAACCGCCATCAAGTAGGAACTTTACCTTTACTTGAGAGGATTGGAAAGCTATCATAAAAAGTCGACTTCCATGTTTTGCATCTTAGGAATAGTGTAGAATGTAACAACAATGGATTCTCCTCTCATGAAAAGGTAAATATCGAACTTGTTTCTCCTCTCATGAACTTGGAAGTCTCTGTGGTGCATATTAACATATTGAACTTGAACTTGGAAGTCTCTGTGCTTAATTCATGTGTATGGCATGTATATACAATTCCAAAATGTGACCACCTGAGTAATTCGCTAGCAAAAGCACTCTGGTAAATTTCAGACATGCTGAGTATTTTGATGATTTGAAGGCTTATAGGCTATACAAGTTTAGTTTTATTTATTTATTATAGTAAAAAAACTATAATTTTTGTTTCTCCGATGTTAGCTCTCAGTTGTGGTGGATTTGAACTTTCACAAATTACTATTATATTTGTTACTTGTCATGGATGATAAATTACTATTATATTTGTTACTTGTCATGGCTGATACTATACTAATCAAATCAATCAGACCACTCGCATTCGCAGATCATGTTCAAGTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020252208.1	1.1e-25	LOW QUALITY PROTEIN: cytochrome P450 86A1-like, partial
Swissprot	Q850K7.2	1.0e-23	OsaEXPb3.1
trEMBL	A0A6P5HGN0	9.1e-25	cytochrome P450 86A1-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G58860.1	45.00	1e-23	105	CYP86;CYP86A1;HORST	cytochrome P450, family 86, subfamily A, polypeptide 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC6G04029	AT5G58860.1	140	56	3	2	141	64	182	45.00	1e-23	105
AfisC6G04029	AT1G63710.1	138	54	4	2	138	61	176	44.20	2e-19	91.7
AfisC6G04029	AT2G45970.1	115	39	4	24	138	83	176	47.83	3e-19	90.9

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01357.18	Pollen_allerg_1	Domain	33	90	26.2	5.7e-06

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0016020	C	membrane
GO:0005576	C	extracellular region
GO:0046872	F	metal ion binding
GO:0055114	P	oxidation-reduction process
GO:0006631	P	fatty acid metabolic process
GO:0009505	C	plant-type cell wall
GO:0009506	C	plasmodesma
GO:0009611	P	response to wounding
GO:0009826	P	unidimensional cell growth
GO:0009828	P	plant-type cell wall loosening
GO:0019825	F	oxygen binding
GO:0016709	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
GO:0018685	F	alkane 1-monooxygenase activity
GO:0035336	P	long-chain fatty-acyl-CoA metabolic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network